Gene VC0395_A1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1508 
SymbolppiD 
ID5136972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1620001 
End bp1621860 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content46% 
IMG OID640532966 
Productpeptidyl-prolyl cis-trans isomerase D 
Protein accessionYP_001217451 
Protein GI147674490 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.93924e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGATC GATTACGCGA AGGCGTGAAC AGCATCGCGG TTAAAATTAT CCTTGGATTA 
ATCATCCTGT CTTTCATTTT TGCTGGTGTA GGTAACTACC TGATCAGCGG CGGTAATAAC
GCGGCCGCTA AAGTCGGCAA TGCGGAAATC AGTCGTGGTG ATTTTGAGCA AGCCTATCAA
AACGAACGTA ACCGTATGCA AGCTCAACTG GGCGATTATT TTTCAAACTT GCTGGCGGAT
CCGACCTATG TCGCCTCTTT CCGTAAGTCA GTATTAGATC GTATGGTGAA CGATTTGCTC
TTAGAGCAAC ATGCAGCGTC ACTAGGGCTA CGTGTGAGTG ATGAGCAAGT TCGTCAATTG
ATTTTAGAAA TCCCACAATT TCAATCTCAA GGCGTATTTG ACTCTACGGC TTACCAAGCG
ACTCTGCGTC GCGCAGGCTT TACTCCTGAG ATGTATGCTG AATACTTACG CAAAGATTTA
GTGCGTAATC AATTGATGAG TGCATTGCAG GGAAGTGAAT TCAGCCTTGC TGGTGAAGTA
AACTTGCAAG ACCAATTGAT TTCTCAGACG CGTGATATTC GTACGATCAC CTTATCTCTA
GAAGACTTCG CAAAAAAAGT GACGTTGAGC GATGAAGAGA TCGATCAGTA CTACAAAACT
AACACCGAGC GTTTTACTCG CCCTGAGCAG GTAAAAGTCT CTTATGTCGA GCTCTCTGCT
GATGGACTGA AAGCGCAAGT GAGCGTTGAT GATGCGGCAG CGCAGCAGTA CTACCAAGAA
CATTTGGATA AGTACTCTAC TGCAGAGCAG CGCAATGTGA GCCATATCCT GATTGAAGGT
AATGATGAGC AAAAAGCACA AGCGATTTTG GATGAACTGA ATGCTGGTGC TGATTTTGCG
ACTTTAGCGA AAGAAAAATC GCAAGATCTC GGCAGTGCAG CAGAGGGCGG CTCACTGGGT
TGGATTGAAC CTGACACTAT GGACCCAGCT TTCGAAGCGG CAGCATTTGC ATTAACTGAA
AAGGGTCAAG TTTCGGGTCT TGTAAAGTCT GATTTCGGTT ATCACATCAT TCGCTTAGAC
GACATCAAAG CACCTGTGGT GAAGCCATAC AGTGAAGTTG AGCAGGCGAT CAAACAAGAA
CTGATTGATC AGCAAGCCCT TGATAGTTTC TATGCTAAGC AGAGTGAACT TGAAAAGATG
GCATTTGAAC ATTCAGACTC TCTGGATGAA GCGGCCAAGG CTATCTCAGC TACGGTTGTG
CACACCGATT TTATCTCTGC CGAACAAGCT CCTGAGGTGT TAACCACTCC TGCGGTACTG
CAAGCGCTGA AATCACCAGA AGTGAAAGAA GATGGTCTCA ACTCTGAAGT GATTGAAGTA
GCTCCAGAGC ATGTCGTGGT GGTGCGTGTT GAAGAGTTTC GTCCAGAAAC TGTGCTGCCA
CTTGATGAAG TCAAATCGCA AGTGGTTGAG CAGCTATCTC GTATGAAAGG TGAACAACAA
GCACTTGAAC TGGGTAACCA GCTTGTGACT GCGTTGAAAG CGGGTGAAAC GGATCTGCTA
GCGCAAAAAG GTGTGTCTTT TGGCGAATTA CAAATGATCG ATCGCAGTTC ACCTCTTGCC
AACACGGTTT ACGCCATGGT GAAACCACAA GAGGGCGAGA AGGTTTATGC CCAAGCGAAA
GATTTTGACG GCAATATCGT TGTGATTGAG TTGAGCAAAG TGGAAAGTAA ACTGACACCG
GCTTATCACG AACAGATCGC TACACAGTTA GAACGTATCG GTTCTCAGCA AGATCTGGCG
GGTGTGATCA GTGTGTTGCG TCAAAACACC GATATTGAGT ATCACATTGC GACAGAATAA
 
Protein sequence
MMDRLREGVN SIAVKIILGL IILSFIFAGV GNYLISGGNN AAAKVGNAEI SRGDFEQAYQ 
NERNRMQAQL GDYFSNLLAD PTYVASFRKS VLDRMVNDLL LEQHAASLGL RVSDEQVRQL
ILEIPQFQSQ GVFDSTAYQA TLRRAGFTPE MYAEYLRKDL VRNQLMSALQ GSEFSLAGEV
NLQDQLISQT RDIRTITLSL EDFAKKVTLS DEEIDQYYKT NTERFTRPEQ VKVSYVELSA
DGLKAQVSVD DAAAQQYYQE HLDKYSTAEQ RNVSHILIEG NDEQKAQAIL DELNAGADFA
TLAKEKSQDL GSAAEGGSLG WIEPDTMDPA FEAAAFALTE KGQVSGLVKS DFGYHIIRLD
DIKAPVVKPY SEVEQAIKQE LIDQQALDSF YAKQSELEKM AFEHSDSLDE AAKAISATVV
HTDFISAEQA PEVLTTPAVL QALKSPEVKE DGLNSEVIEV APEHVVVVRV EEFRPETVLP
LDEVKSQVVE QLSRMKGEQQ ALELGNQLVT ALKAGETDLL AQKGVSFGEL QMIDRSSPLA
NTVYAMVKPQ EGEKVYAQAK DFDGNIVVIE LSKVESKLTP AYHEQIATQL ERIGSQQDLA
GVISVLRQNT DIEYHIATE