| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1508 |
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| Symbol | ppiD |
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| ID | 5136972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1620001 |
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| End bp | 1621860 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532966 |
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| Product | peptidyl-prolyl cis-trans isomerase D |
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| Protein accession | YP_001217451 |
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| Protein GI | 147674490 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000293924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATC GATTACGCGA AGGCGTGAAC AGCATCGCGG TTAAAATTAT CCTTGGATTA
ATCATCCTGT CTTTCATTTT TGCTGGTGTA GGTAACTACC TGATCAGCGG CGGTAATAAC
GCGGCCGCTA AAGTCGGCAA TGCGGAAATC AGTCGTGGTG ATTTTGAGCA AGCCTATCAA
AACGAACGTA ACCGTATGCA AGCTCAACTG GGCGATTATT TTTCAAACTT GCTGGCGGAT
CCGACCTATG TCGCCTCTTT CCGTAAGTCA GTATTAGATC GTATGGTGAA CGATTTGCTC
TTAGAGCAAC ATGCAGCGTC ACTAGGGCTA CGTGTGAGTG ATGAGCAAGT TCGTCAATTG
ATTTTAGAAA TCCCACAATT TCAATCTCAA GGCGTATTTG ACTCTACGGC TTACCAAGCG
ACTCTGCGTC GCGCAGGCTT TACTCCTGAG ATGTATGCTG AATACTTACG CAAAGATTTA
GTGCGTAATC AATTGATGAG TGCATTGCAG GGAAGTGAAT TCAGCCTTGC TGGTGAAGTA
AACTTGCAAG ACCAATTGAT TTCTCAGACG CGTGATATTC GTACGATCAC CTTATCTCTA
GAAGACTTCG CAAAAAAAGT GACGTTGAGC GATGAAGAGA TCGATCAGTA CTACAAAACT
AACACCGAGC GTTTTACTCG CCCTGAGCAG GTAAAAGTCT CTTATGTCGA GCTCTCTGCT
GATGGACTGA AAGCGCAAGT GAGCGTTGAT GATGCGGCAG CGCAGCAGTA CTACCAAGAA
CATTTGGATA AGTACTCTAC TGCAGAGCAG CGCAATGTGA GCCATATCCT GATTGAAGGT
AATGATGAGC AAAAAGCACA AGCGATTTTG GATGAACTGA ATGCTGGTGC TGATTTTGCG
ACTTTAGCGA AAGAAAAATC GCAAGATCTC GGCAGTGCAG CAGAGGGCGG CTCACTGGGT
TGGATTGAAC CTGACACTAT GGACCCAGCT TTCGAAGCGG CAGCATTTGC ATTAACTGAA
AAGGGTCAAG TTTCGGGTCT TGTAAAGTCT GATTTCGGTT ATCACATCAT TCGCTTAGAC
GACATCAAAG CACCTGTGGT GAAGCCATAC AGTGAAGTTG AGCAGGCGAT CAAACAAGAA
CTGATTGATC AGCAAGCCCT TGATAGTTTC TATGCTAAGC AGAGTGAACT TGAAAAGATG
GCATTTGAAC ATTCAGACTC TCTGGATGAA GCGGCCAAGG CTATCTCAGC TACGGTTGTG
CACACCGATT TTATCTCTGC CGAACAAGCT CCTGAGGTGT TAACCACTCC TGCGGTACTG
CAAGCGCTGA AATCACCAGA AGTGAAAGAA GATGGTCTCA ACTCTGAAGT GATTGAAGTA
GCTCCAGAGC ATGTCGTGGT GGTGCGTGTT GAAGAGTTTC GTCCAGAAAC TGTGCTGCCA
CTTGATGAAG TCAAATCGCA AGTGGTTGAG CAGCTATCTC GTATGAAAGG TGAACAACAA
GCACTTGAAC TGGGTAACCA GCTTGTGACT GCGTTGAAAG CGGGTGAAAC GGATCTGCTA
GCGCAAAAAG GTGTGTCTTT TGGCGAATTA CAAATGATCG ATCGCAGTTC ACCTCTTGCC
AACACGGTTT ACGCCATGGT GAAACCACAA GAGGGCGAGA AGGTTTATGC CCAAGCGAAA
GATTTTGACG GCAATATCGT TGTGATTGAG TTGAGCAAAG TGGAAAGTAA ACTGACACCG
GCTTATCACG AACAGATCGC TACACAGTTA GAACGTATCG GTTCTCAGCA AGATCTGGCG
GGTGTGATCA GTGTGTTGCG TCAAAACACC GATATTGAGT ATCACATTGC GACAGAATAA
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| Protein sequence | MMDRLREGVN SIAVKIILGL IILSFIFAGV GNYLISGGNN AAAKVGNAEI SRGDFEQAYQ
NERNRMQAQL GDYFSNLLAD PTYVASFRKS VLDRMVNDLL LEQHAASLGL RVSDEQVRQL
ILEIPQFQSQ GVFDSTAYQA TLRRAGFTPE MYAEYLRKDL VRNQLMSALQ GSEFSLAGEV
NLQDQLISQT RDIRTITLSL EDFAKKVTLS DEEIDQYYKT NTERFTRPEQ VKVSYVELSA
DGLKAQVSVD DAAAQQYYQE HLDKYSTAEQ RNVSHILIEG NDEQKAQAIL DELNAGADFA
TLAKEKSQDL GSAAEGGSLG WIEPDTMDPA FEAAAFALTE KGQVSGLVKS DFGYHIIRLD
DIKAPVVKPY SEVEQAIKQE LIDQQALDSF YAKQSELEKM AFEHSDSLDE AAKAISATVV
HTDFISAEQA PEVLTTPAVL QALKSPEVKE DGLNSEVIEV APEHVVVVRV EEFRPETVLP
LDEVKSQVVE QLSRMKGEQQ ALELGNQLVT ALKAGETDLL AQKGVSFGEL QMIDRSSPLA
NTVYAMVKPQ EGEKVYAQAK DFDGNIVVIE LSKVESKLTP AYHEQIATQL ERIGSQQDLA
GVISVLRQNT DIEYHIATE
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