| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1505 |
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| Symbol | rpsA |
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| ID | 5135796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1616916 |
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| End bp | 1618586 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532963 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001217448 |
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| Protein GI | 147673739 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000598437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAGTTTCTGA ACGAGACCCA ATTCCAACAA
GGTACTATCG TTAAAGGTAC TGTAGTAGCA ATCGAGAACG GCTACGTTCT GGTTGATGCT
GGCCTGAAGT CTGAGTCTGC TATCCCTGCT GAACAATTCA AGAACGCTGC TGGCGAACTA
GAAGTTCAAG TAGGTTCTCA AGTAGACGTA GCTCTGGACG CGGTTGAAGA TGGTTTCGGC
GAAACTCAAC TTTCTCGTGA GAAAGCGAAG CGCCATGAAG CTTGGATCGT ACTTGAAAAA
GCTTACGAAG AAGCTGCAAC TGTTATCGGT ATCATTAACG GTAAAGTTAA AGGCGGTTTC
ACTGTTGAAC TGAACGGTAT CCGTGCGTTC CTGCCAGGTT CTCTGGTTGA CGTACGTCCA
ATCCGTGACA CTGCTCACCT AGAAAACAAA GAGCTAGAGT TCAAAGTTAT CAAGCTAGAC
CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCTGA AAGCAGCGTA
GAGCGTGATG AACTGCTTGA AACTCTGCAA GAAGGTACTG AAGTTAAAGG TATCGTTAAG
AACCTGACTG ACTACGGTGC GTTCGTTGAT CTGGGCGGCG TTGACGGTCT GCTACACATC
ACTGACATGG CTTGGAAGCG CGTTAAGCAT CCATCAGAAA TCGTTAACGT TGGTGACGAG
ATCCTAGTTA AAGTACTGAA GTTCGATCGT GATCGTACTC GCGTATCTCT AGGTCTGAAA
CAGCTAGGCG AAGATCCATG GGTAGCAATC GCTAAGCGTT ACCCAGAAGG TCACAAACTG
TCTGGCCGTG TAACTAACCT GACTGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT
GAAGGTCTAG TACACGTTTC TGAAATGGAC TGGACGAACA AGAACATCCA CCCATCTAAA
GTTGTTAATG TTGGCGACGA AGTTGAGGTT ATGGTTCTGG ATATCGACGA AGAGCGTCGT
CGTATCTCTC TAGGCCTGAA ACAGTGTAAA GCTAACCCAT GGCAATCATT CGCTGAAGCG
CAAGCTAAAG GCGACAAAGT AACTGGTAAG ATCAAGTCTA TCACTGACTT TGGTATCTTC
ATCGGTCTAG AAGGCGGTAT CGACGGTCTG GTTCACCTGT CTGACATCTC TTGGAACGTA
CCAGGAGAAG AAGCTGTTCG TGAATTCAAG AAAGGCGACG AAATCTCTGC AGTTGTTCTA
GCAGTAGACG CTGAGCGTGA GCGTATTTCT CTGGGCATCA AGCAAATGGA AAACGATCCA
TTCAACGCTT ATGTTTCAGA CAACAAGAAA GGTGCTCTGG TTAACGGTAC TGTAACTGCA
GTTGACGCGA AAGGCGCAAC CATCGAGCTA GAAGACGGCG TTGAAGGTTA CATCCGCGCT
TCTGAAGTAT CACGTGACCG TATCGAAGAT GCATCACTGA TCCTGAACGT TGGTGACAAA
GTTGAAGCGA AATTTACTGG TGTTGACCGT AAAAACCGCG TAATCAACCT GTCTATCAAA
GCGAAAGATG AAGCTGAAGA GCAAGAAGTA ATGGCAACTC TGAACAAGCA AGATGAAGCT
GCGTTCGGTA ATGCTATGGC TGACGCTTTC AAAGCAGCGA AAGGCGAATA A
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| Protein sequence | MTESFAQLFE EFLNETQFQQ GTIVKGTVVA IENGYVLVDA GLKSESAIPA EQFKNAAGEL
EVQVGSQVDV ALDAVEDGFG ETQLSREKAK RHEAWIVLEK AYEEAATVIG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP IRDTAHLENK ELEFKVIKLD QKRNNVVVSR RAVIESESSV
ERDELLETLQ EGTEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ILVKVLKFDR DRTRVSLGLK QLGEDPWVAI AKRYPEGHKL SGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDEVEV MVLDIDEERR RISLGLKQCK ANPWQSFAEA
QAKGDKVTGK IKSITDFGIF IGLEGGIDGL VHLSDISWNV PGEEAVREFK KGDEISAVVL
AVDAERERIS LGIKQMENDP FNAYVSDNKK GALVNGTVTA VDAKGATIEL EDGVEGYIRA
SEVSRDRIED ASLILNVGDK VEAKFTGVDR KNRVINLSIK AKDEAEEQEV MATLNKQDEA
AFGNAMADAF KAAKGE
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