| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1502 |
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| Symbol | |
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| ID | 5137217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1614749 |
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| End bp | 1615918 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532960 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001217445 |
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| Protein GI | 147675765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000018122 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA TACTGTTCCT GTTATTGCCC ATCGCTGCCG CCTACGGCTG GTACATGGGG
CATCGTAGCG CCCAGCAAGA TAAACAGAAA CAATCACACC AAATTTCGCG TCAATACGTG
ACCGGTTTGA ACCTCTTACT CTCCGATCAA TCGGATAAAG CGGTTGATCA CTTTATCGAA
TTACTGCAAG TCGATAATGA AACCATTGAT ACCCATCTAG CACTCGGTAA CCTTTTCCGG
TCTCGTGGCG AAGTGGATCG CGCTATTCGT ATTCACCAAA ACCTTATCTC TCGCTCTGGG
TTGACCATAG ACCAGAAAAA CTTGGCGCTG CAGCAGTTAG CTAAGGACTA TATGGTGTCC
GGTTTTCTTG ATCGTGCTGA GAAAATATTT GAACAACTGA TTGATGAGCC TGAGCATCGT
GAATCTGCTC TCCAGCAGCT CACGGCAATT TATCAACAGA CTCGTGAGTG GCACAAAGCG
ATTGAGTGTG CCACCGCTTT GGTTAAGCTT GGGCGCAAAC GTATGAAGGT GAACATTGCG
CATTTCTACT GCGAGCTGGC CATGCTTGAA AAGGCGGACA GTAACGATAA CAAAGCCATT
CAACTGTTTA AAAAAGCATT ACAAGAAGAT CCGAAATGTG TACGTGCAAC CATTTCACTC
GGTAAACTCT ACCTACAAAA CGAAGACTAT CAGAAGACTA TTGACCATCT AGAGATGGTT
CTTGAGCAAG ATATCGATTT TATCGGTGAA GTGCTCAATA CGTTGGCTGA GTGTTACCAC
CATTTGGGGC GAGAGCAAGA TTTGATCACC TTCTTACGTC GCTGTATCGC CAATAAAGCG
GGGGTATCGG CCGAATTAAT GCTCGCTCAG CTGGTTGCAC AGCATGAAGG TATTGCCGCT
GCACAAGAGA TTTTAACTCG TCAGTTGGTT AAAAATCCTA CTATGAAAGG CTTTTACCGG
TTGATTGATT ACCATATTGC CGAAGCGGAA GAGGGCAGAG CCAAAGCCAG TCTCTCTACG
TTACAACGCT TAGTGGGTGA ACAGCTTAAA GTAAAACCCC ATTACCGTTG CCGTAAATGT
GGCTTTTCGA CCCATTCACT TTATTGGCAT TGCCCATCAT GTAAAAACTG GGGTTCAATC
AAGCCAATCA GAGGCTTAGA TGGTGAGTAA
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| Protein sequence | MLEILFLLLP IAAAYGWYMG HRSAQQDKQK QSHQISRQYV TGLNLLLSDQ SDKAVDHFIE
LLQVDNETID THLALGNLFR SRGEVDRAIR IHQNLISRSG LTIDQKNLAL QQLAKDYMVS
GFLDRAEKIF EQLIDEPEHR ESALQQLTAI YQQTREWHKA IECATALVKL GRKRMKVNIA
HFYCELAMLE KADSNDNKAI QLFKKALQED PKCVRATISL GKLYLQNEDY QKTIDHLEMV
LEQDIDFIGE VLNTLAECYH HLGREQDLIT FLRRCIANKA GVSAELMLAQ LVAQHEGIAA
AQEILTRQLV KNPTMKGFYR LIDYHIAEAE EGRAKASLST LQRLVGEQLK VKPHYRCRKC
GFSTHSLYWH CPSCKNWGSI KPIRGLDGE
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