| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1501 |
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| Symbol | pyrF |
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| ID | 5135731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1613981 |
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| End bp | 1614676 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532959 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001217444 |
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| Protein GI | 147674982 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000199252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACC CAAAAGTGAT TGTTGCACTG GACTATGACA ATCTGGCGGA TGCGCTCGCG
TTTGTGGACA AAATTGACCC AAGCACATGT CGACTCAAAG TGGGTAAAGA GATGTTTACT
CTATTTGGTC CTGATTTTGT CCGTGAGCTG CATAAACGAG GTTTTTCTGT GTTTCTGGAT
CTTAAATTTC ACGATATTCC GAATACCTGT TCAAAAGCGG TGAAAGCTGC CGCTGAGCTT
GGGGTTTGGA TGGTGAATGT GCACGCGAGT GGTGGCGAGC GAATGATGGC AGCATCGCGT
GAGATTCTGG AGCCGTATGG TAAAGAGCGC CCACTGCTGA TTGGTGTCAC TGTATTGACC
AGTATGGAAT CTGCCGATTT ACAAGGTATT GGCATCTTGA GTGCGCCACA AGATCATGTG
CTGCGATTAG CAACGCTCGC CAAAAATGCT GGTCTTGATG GTGTGGTATG CTCCGCACAA
GAGGCATCAC TATTGAAGCA ACATTTGGGG CGTGAATTCA AATTGGTGAC GCCAGGAATT
CGTCCAGCGG GTTCAGAGCA AGGCGATCAA CGCCGTATTA TGACTCCAGC CCAAGCCATT
GCCTCTGGTT CAGATTATCT CGTGATCGGT CGCCCTATCA CTCAAGCCGC ACATCCTGAA
GTGGTTCTGG AAGAGATAAA CAGCTCTTTA GTTTAG
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| Protein sequence | MNDPKVIVAL DYDNLADALA FVDKIDPSTC RLKVGKEMFT LFGPDFVREL HKRGFSVFLD
LKFHDIPNTC SKAVKAAAEL GVWMVNVHAS GGERMMAASR EILEPYGKER PLLIGVTVLT
SMESADLQGI GILSAPQDHV LRLATLAKNA GLDGVVCSAQ EASLLKQHLG REFKLVTPGI
RPAGSEQGDQ RRIMTPAQAI ASGSDYLVIG RPITQAAHPE VVLEEINSSL V
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