| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1490 |
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| Symbol | fadR |
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| ID | 5136198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1601170 |
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| End bp | 1602009 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532948 |
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| Product | fatty acid metabolism regulator |
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| Protein accession | YP_001217433 |
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| Protein GI | 147675341 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCATTA AGGCAAAAAG CCCAGCCGGT TTCGCTGAGA AGTATATTAT TGAAAGTATT
TGGAACGGCC GCTTTCCGCC AGGTTCCATC TTACCTGCAG AGCGTGAGCT TTCTGAATTG
ATCGGTGTTA CGCGTACCAC ACTACGTGAG GTGTTACAGC GTTTAGCGCG TGATGGTTGG
CTCACGATTC AACACGGTAA ACCCACCAAG GTGAATCAGT TTATGGAAAC ATCAGGTTTG
CATATTCTTG ATACCTTGAT GACTCTTGAT GCAGAGAATG CCACCAGCAT TGTTGAAGAC
TTACTAGCTG CAAGAACCAA TATCAGCCCC ATTTTCATGC GTTACGCTTT TAAGCTAAAT
AAAGAGAGCG CAGAGCGGAT CATGATCAAT GTGATTGAGT CTTGTGAAGC CTTGGTTAAC
GCCCCTTCTT GGGATGCGTT TATCGCAGCT TCTCCCTATG CGGAAAAAAT CCAGCAGCAC
GTGAAAGAAG ACAGCGAAAA AGATGAGCTC AAAAGGCAGG AAATCTTGAT CGCGAAAACA
TTTAATTTCT ACGATTACAT GTTATTCCAG CGTCTCGCTT TCCATTCTGG TAACCAGATT
TACGGTTTGA TCTTTAACGG GTTGAAAAAG CTGTATGACC GTGTGGGAAG TTACTATTTT
TCCAATCCTC AAGCGCGTGA ATTGGCCATG GAATTCTACC GTCAGTTGTT AGCTGTGTGC
CAAAGCGGCG AGCGTGAGCA TTTGCCTCAG GTTATTCGTC AGTATGGTAT TGCTAGCGGA
CACATCTGGA ATCAGATGAA AATGACGCTG CCGTCCAATT TTACTGAAGA CGATTGCTAA
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| Protein sequence | MVIKAKSPAG FAEKYIIESI WNGRFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW
LTIQHGKPTK VNQFMETSGL HILDTLMTLD AENATSIVED LLAARTNISP IFMRYAFKLN
KESAERIMIN VIESCEALVN APSWDAFIAA SPYAEKIQQH VKEDSEKDEL KRQEILIAKT
FNFYDYMLFQ RLAFHSGNQI YGLIFNGLKK LYDRVGSYYF SNPQARELAM EFYRQLLAVC
QSGEREHLPQ VIRQYGIASG HIWNQMKMTL PSNFTEDDC
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