| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1477 |
|---|
| Symbol | |
|---|
| ID | 5137498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 1587152 |
|---|
| End bp | 1587952 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640532935 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217420 |
|---|
| Protein GI | 147675587 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.235152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGT GTGAAACACT GAACGATGGA GTGACAATGA AAAGATTGAT CCCACTGCTG
CTGTTGCTGA TTGCAATGCC CAGCATGGCG GCTCGGCAGT TTGATATTGA AGTGATCATT
TTTAAACGAG CAGTAGATGC GGAAAAAGTG AGTGAGTCTT GGCCTAACAG CTTACCTGCC
ATCAATGTTG ATCGCGCAGG CAGTTTTGCC GATGTTAGCT TTCGCCAAAG TAAAGGCGTA
ACACTATTGC CAAGCTCCGC TTATCAACTC AATAGTGAAG CGCAGAAATT ACGCAACCAC
GCAGGCTTCA ATGTGTTACT GCATACCGCT TGGCGTCAAA ATGATCAGGG TCGCCAATCC
GCTCCTGTAT TCCATATTCA AGCAGGTCGA GATTTTTCTG GGCAGTTTCA AGCCAATGGA
AGCCCAGTTG GCAGCACAGT CACCGCCCCC GTAGATGGTG TCAGTGAAAT GAGCATCGCC
AACCCGCTGT ATGAACTTGA TGGCACTTTA CAAATTTACG TTCAGCACTT TTTGTTTGCT
GAAGCCGTGC TGGATTTGAA AAAGCCCTCG GTACGCGAAG TCGTATTGCA AGACTCGCCT
TTAGAATTGG GCACTAATGA AGAACAAGGC GCAACGGTAC AAGCCGGCAT GCTTGAATCG
GTCTCACCTA AAGTTCAGGA AGAAACCTTC CTGAAAAGTT ATCGTCTCGA TCAGAAACGC
CGTATGCGCA GTGGTGAAAC CCACTATCTG GATCACCCTC TCATGGGCGT GATCATTCAA
GTCCGCCGCG TTGCTGAGTA A
|
|---|
| Protein sequence | MTQCETLNDG VTMKRLIPLL LLLIAMPSMA ARQFDIEVII FKRAVDAEKV SESWPNSLPA
INVDRAGSFA DVSFRQSKGV TLLPSSAYQL NSEAQKLRNH AGFNVLLHTA WRQNDQGRQS
APVFHIQAGR DFSGQFQANG SPVGSTVTAP VDGVSEMSIA NPLYELDGTL QIYVQHFLFA
EAVLDLKKPS VREVVLQDSP LELGTNEEQG ATVQAGMLES VSPKVQEETF LKSYRLDQKR
RMRSGETHYL DHPLMGVIIQ VRRVAE
|
|---|
| |