| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1465 |
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| Symbol | |
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| ID | 5135248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1571420 |
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| End bp | 1572970 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532923 |
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| Product | SpoVR family protein |
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| Protein accession | YP_001217408 |
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| Protein GI | 147675162 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2719] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACCA AAGCCAAAGC CGCACCTAAG CGTAAAGTAG CGAACAGTAA GCGACTGCCC
GATGGCCCAG ATTGGACGTT TGAACTGATC GAGCGCTACC ATCAAGAAAT CCGTCGCGTG
GCAGAGCTTT ATCGTTTGGA CACTTACCCA AACCAGATTG AGATCATCAC CTCAGAGCAG
ATGATGGATG CCTATTCCAG CATCGGCATG CCAATCAACT ACAACCATTG GTCGTTTGGT
AAAAAATTCA TTCAAACCGA GCAAACCTAC AAACATGGTC AGATGGGGTT GGCATACGAA
ATTGTGATTA ACTCCGATCC TTGTATCGCC TATCTAATGG AAGAAAACAC CGTAACCATG
CAAGCGCTGG TGATGGCGCA TGCCTGTTAC GGCCACAACT CCTTCTTCAA AGGCAACTAT
CTATTCCAAA CCTGGACAGA TGCCAGCTCG ATCATCGATT ACCTGCTGTT TGCCAAAAAC
TACATTGCTG AGTGTGAGCA GAAATTTGGC GTGAACGAAG TGGAAAAGCT ACTCGACTCT
TGCCATGCGC TAATGAATTA CGGGGTTGAC CGTTATAAAC GCCCCGAAAA AATCTCGATT
GCCGAAGAAA AAGCGCGTCA AGAAGAGCGC GAAGCTTATC TGCAATCACA AGTGAATGCC
TTATGGCGTA CCGTACCGAA AAAAGCCGTA GAGCAAGAAA AGCAGCGCCG CTTCCCGAGT
GAACCACAAG AAAACATTCT CTATTTTATT GAGAAACACG CCCCTTTGCT GGAGCCTTGG
CAACGTGAAA TCGTGCGTAT TGTGCGTAAA GTCAGCCAGT ATTTTTATCC ACAAAAGCAG
ACGCAAGTCA TGAACGAAGG ATGGGCGACG TTTTGGCACT ACACCATACT CAACCATCTT
TATGATGAAG GCTTACTCAG CGACAAGTTC ATGCTGGAGT TTTTGCACAG TCACACCAGC
GTTGTGGCAC AGCCGCCCTA CAACAGCCGT TATTTCAGTG GCATTAACCC TTATGCACTC
GGTTTTGCCA TGTTCCGTGA TATTAAGCGG ATCTGCGAAG AGCCGACCGA GGAAGATAAA
GAGTGGTTCC CAGAGTTGGC CGGCGCAAAC TGGTTGGATG CGCTTCATTT TGCGATGCGC
AACTTTAAAG ATGAGAGCTT TATCAGCCAA TATCTGTCAC CTAAGCTGAT CCGCGACTTT
AAGTTCTTTG CGATTTGCGA TGATGATAGA AAAAATCACA TTGAAATCAG TGCTATTCAC
GATGATCTCG GATATCAACA AATCCGCGAG AAACTCGCGG CGCAATACAA TCTCAGTAAT
CTTGAACCCA ACATTCAAGT GTATAGCGTT GATGTTCGAG GCGACCGTTC GTTAACCTTG
CAGTATGTAC CACACGATCG TATTCCGTTA GATCCAAGCT ACGAGGAGGT GCTAAAACAC
TTGCACCGTC TATGGGGTTT TGAAGTCAAA CTGGAGGAGG TCAAAGACAC AGGAAGAAGA
GAGATCCTCG CAACCTGCCC CAAAAAGAAC GACTCGGAAA GTCGAATCTA A
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| Protein sequence | MTTKAKAAPK RKVANSKRLP DGPDWTFELI ERYHQEIRRV AELYRLDTYP NQIEIITSEQ
MMDAYSSIGM PINYNHWSFG KKFIQTEQTY KHGQMGLAYE IVINSDPCIA YLMEENTVTM
QALVMAHACY GHNSFFKGNY LFQTWTDASS IIDYLLFAKN YIAECEQKFG VNEVEKLLDS
CHALMNYGVD RYKRPEKISI AEEKARQEER EAYLQSQVNA LWRTVPKKAV EQEKQRRFPS
EPQENILYFI EKHAPLLEPW QREIVRIVRK VSQYFYPQKQ TQVMNEGWAT FWHYTILNHL
YDEGLLSDKF MLEFLHSHTS VVAQPPYNSR YFSGINPYAL GFAMFRDIKR ICEEPTEEDK
EWFPELAGAN WLDALHFAMR NFKDESFISQ YLSPKLIRDF KFFAICDDDR KNHIEISAIH
DDLGYQQIRE KLAAQYNLSN LEPNIQVYSV DVRGDRSLTL QYVPHDRIPL DPSYEEVLKH
LHRLWGFEVK LEEVKDTGRR EILATCPKKN DSESRI
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