Gene VC0395_A1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1446 
SymboldinG 
ID5136385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1547337 
End bp1549448 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content47% 
IMG OID640532904 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_001217389 
Protein GI147673160 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000107544 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTACCAT CGCGCCATCG TACTTTGGAC ACCTCTATGC TGACAAAAAA CATTCAAGAT 
TCCATTCGCA ACAGTTATCA AAATCTACAA AATCAATTGG AAAATTTCAT TCCTCGTCGC
GCTCAAAATT TCCTAGTTGC CGAGATGGCC AAAACCCTTT GTGGGGCTTA TCACAAATCG
ACTCAAATGT TAGTGGCCGA AGCAGGAACA GGCATAGGAA AGTCTCTCTC CTATTTAATG
GCGGTTATCC CTGTGGCGGT GGTGAATAAG CGGAAAGTCG TGATCTCCAC AGCCACAGTG
GCTCTTCAAG AGCAACTGCT CAATAAAGAC TTACCGCTTT ATCGCAGGAT CAGTGATCAA
AACTTCTCAT TTATTCTTGC GAAAGGCCGT CAACGTTATT GTTGTAGCGA ACGTTTAGCC
GCAGCCTGTG GGATTGATGA TGGGCAAATC GCGCTATTTG AAAGTAAACC CAAACCTCAT
GAGACAGAGC TGCTTGCAGA GCTGCATACT GCCCTAAGCC AAGGGAAATG GGATGGTGAC
CGTGATGGCT GGCCAAGTCC GATTAGTGAT GAATTGTGGT CAGTCATTGT CAGCGATAAA
CATAGTTGTA ATGGCAGCTT TAGTGTTCAT CGCCACTGTC CGTTTCAGAA GGCACGTTCA
GAACTGGATA AGGCCGATGT GATTATTGCT AACCATAGTC TAGTGATGGC CGACGCGGAC
TTAGGTGGGG GCGTTATCCT CCCCGCACCC GAAGAAACGA TTTATGTTTT TGACGAAGCG
CACCATCTCC CTACGGTCGC GCGCGAGCAT GCATCGGCAG CCGCGACGTT AAAAGGAGCC
GCAAGCTGGC TAGAAAAGCT CAATCAATCC TTATCCAAGT TCACCGCTCT AGGTGATGAA
AAACGTGCCG AGCGATTCGC TGAAGAGGCG CGCACGGCGA TACAGTACTT AATCCCGACT
TTGAATCAGT TACCCAAACA GTTTATGGCT GAACAATTTG TTGAGGGAAT TTACCGTTTT
GAGCACGGCG AGTTACCACA ATGGCTGGCT GATGAGTCAC AAGCACTTAG TAAGTCATCA
CAAAAAGCGA TGCAATCTGT GAGTAAAGTA GCTGATTTAA TTGCTGAAAA AGTAAAAGAA
GGCGAACTTG CAACACGCAT CGCTGAACCT GCGTTGGGCG AATTGGGGTT TTACGTACAA
CGTCTAGAAA ACTTGACCCA AGTATGGCAA CTGATGGCAA AACCTAACAA AGATAAAGGG
GCCCCTTTAG CACGCTGGCT TGAAGTCAGT CCTGAACGAG AAGGTGACTA TTTAGTCAGT
GTTTCGCCAC TCGAAATCGG CTGGCAACTG GATCAGCAGC TTTGGAGCCG CTGTGTGGGC
GCGATATTAG TTTCTGCAAC CTTAAGAGCA TTAAATTCAT TCGGCTTCTT CTGTCGGCAA
GCTGGGATCA GTGACAAAGC GGAAGATGGA GTGCAATTTT TAGCTTTAGC CTCGCCATTT
GATTACCCTA CGCAAGGTGA ATTGCTGATC CCAAAAATGG AAATGGAGCC ACAAGCCGAG
GGCTATACTG CCTATTTAGC CAAAAAAGTA TTGTGTTATC TGCAAGCTGA CAAAGCCAAT
TTGGTCCTCT TTGCTTCTTA TTGGCAAATG CGTGAAGTGG CAGAGTCTTT AAAAGTCGAG
TTCACAAAAC GTGGTTGGGC ACTGCAGGTG CAAGGTGAGA AATCTCGATC AGAAATTCTA
AATAAACATA AAAAGCTGAT TGAAAAACAG AAAACCAGTG TTTTATTTGG CACTGGAAGT
TTTTCGGAAG GTCTAGATTT GCCCGGTGAA CTCCTCGAAA ATCTGATCAT CACCAAAATC
CCCTTTGCCG TTCCAACCTC TCCGGTAGAA CAAGCACATG CCGAATATAT TCAAGAGCTG
GGCGGTAACC CTTTCATGCA AATTACCGTT CCTGAAGCCA GCAAAAAGCT CATCCAGTCT
GTTGGGCGTC TACTGCGCAA AGAGCGAGAT TCTGGTAGAG TGGTCATCCT TGATCGGCGG
GTAGTATCAA AGCGTTACGG AAAAGCGTTG TTGGATGCCT TACCGCCCTT TAAGCGCACG
ATTGAATACT GA
 
Protein sequence
MLPSRHRTLD TSMLTKNIQD SIRNSYQNLQ NQLENFIPRR AQNFLVAEMA KTLCGAYHKS 
TQMLVAEAGT GIGKSLSYLM AVIPVAVVNK RKVVISTATV ALQEQLLNKD LPLYRRISDQ
NFSFILAKGR QRYCCSERLA AACGIDDGQI ALFESKPKPH ETELLAELHT ALSQGKWDGD
RDGWPSPISD ELWSVIVSDK HSCNGSFSVH RHCPFQKARS ELDKADVIIA NHSLVMADAD
LGGGVILPAP EETIYVFDEA HHLPTVAREH ASAAATLKGA ASWLEKLNQS LSKFTALGDE
KRAERFAEEA RTAIQYLIPT LNQLPKQFMA EQFVEGIYRF EHGELPQWLA DESQALSKSS
QKAMQSVSKV ADLIAEKVKE GELATRIAEP ALGELGFYVQ RLENLTQVWQ LMAKPNKDKG
APLARWLEVS PEREGDYLVS VSPLEIGWQL DQQLWSRCVG AILVSATLRA LNSFGFFCRQ
AGISDKAEDG VQFLALASPF DYPTQGELLI PKMEMEPQAE GYTAYLAKKV LCYLQADKAN
LVLFASYWQM REVAESLKVE FTKRGWALQV QGEKSRSEIL NKHKKLIEKQ KTSVLFGTGS
FSEGLDLPGE LLENLIITKI PFAVPTSPVE QAHAEYIQEL GGNPFMQITV PEASKKLIQS
VGRLLRKERD SGRVVILDRR VVSKRYGKAL LDALPPFKRT IEY