Gene VC0395_A1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1436 
SymbolruvB 
ID5136668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1537998 
End bp1539002 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content47% 
IMG OID640532894 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_001217379 
Protein GI147673267 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000380468 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAG CCGATCGTTT AATTGCTCCA ATCAGCAACC ACTTCAAAGA TGAGGAAGTG 
ATTGATCGAG CGATTCGTCC CAAAAAGCTT GCCGATTACC AAGGTCAAGA TCATGTTCGT
GATCAGATGG AAATCTTCAT TCAAGCGGCA CAAATGCGCC AAGAAGCCTT AGATCATCTG
CTGATTTTCG GGCCTCCGGG CTTGGGTAAA ACCACCTTGG CCAACATAGT CGCTAACGAA
ATGGGCGTGA ATATTCGTAC TACTTCAGGT CCTGTATTGG AAAAAGCGGG AGATTTAGCG
GCACTGCTAA CCAATCTTGA AGAAAACGAT GTGCTGTTTA TTGATGAAAT CCATCGTCTG
AGCCCAATGG TTGAGGAAGT ACTGTATCCC GCTATGGAAG ATTACCAACT CGATATCATG
ATTGGTGAAG GCCCAGCTGC ACGCTCAATC AAAATCGATC TCCCTCCTTT TACTTTAATT
GGAGCCACCA CACGTGCAGG CTCGCTGACT TCACCACTGC GTGACCGATT TGGGATTGTG
CAACGATTGG AGTATTACAA AGTCGCCGAT TTACAACACA TAGTGCAACG TAGTGCACAG
TGTCTCGGTC TTTCGATGGA TAGTGAGGGC GCTCTTGAAG TGGCTCGCCG TGCACGTGGA
ACCCCACGGA TTGTCAATCG CCTGCTGCGC CGGGTACGAG ATTATGCCGA AGTAAAAGGG
GATGGGCACA TTTGTGCGCA AACCGCTGAC AGGGCACTCA ATATGCTTGA TGTTGACCAT
CAAGGCTTTG ATTACATGGA TAGAAAGCTG CTGTTAGCAA TAATGGAAAA GTTTTCAGGT
GGCCCAGTCG GAATCGATAA CCTTGCGGCA GCTATTGGCG AAGAGAAAGA TACGATAGAA
GATGTTCTTG AGCCATTTCT CATTCAGCAG GGTTATTTAC AACGTACACC ACGCGGTCGT
ATCGCGACAG ATCGCGCTTA TTTGCATTTC GGTATTGAAA AATAA
 
Protein sequence
MIEADRLIAP ISNHFKDEEV IDRAIRPKKL ADYQGQDHVR DQMEIFIQAA QMRQEALDHL 
LIFGPPGLGK TTLANIVANE MGVNIRTTSG PVLEKAGDLA ALLTNLEEND VLFIDEIHRL
SPMVEEVLYP AMEDYQLDIM IGEGPAARSI KIDLPPFTLI GATTRAGSLT SPLRDRFGIV
QRLEYYKVAD LQHIVQRSAQ CLGLSMDSEG ALEVARRARG TPRIVNRLLR RVRDYAEVKG
DGHICAQTAD RALNMLDVDH QGFDYMDRKL LLAIMEKFSG GPVGIDNLAA AIGEEKDTIE
DVLEPFLIQQ GYLQRTPRGR IATDRAYLHF GIEK