| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1367 |
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| Symbol | |
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| ID | 5135314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1466731 |
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| End bp | 1469112 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640532825 |
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| Product | putative DNA methylase HsdM |
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| Protein accession | YP_001217310 |
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| Protein GI | 147674983 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCACT CAGTACATAA CAAACTCGTT TCATTTATTT GGTCGATTGC CGACGACTGT
CTTCGTGATG TCTATGTTCG TGGTAAATAC CGCGACGTTA TCTTGCCTAT GGTGGTGCTA
CGCCGTCTGG ATACGCTTTT GGAGCCATCA AAAGAAGCAG TACTGGAAGA AGTCAGATTC
CAAAAAGAAG AGATGAATGA AATTGAGCTT GATGACGCAC CATTATGCGC TACATCAGGT
TATGTGTTCT ACAACACGTC CAAGTGGACT CTGCAAACGC TATTCAGTAC AGCGACTAAC
AACCAACAGA TTCTGCTGGC TAACTTCGAA GATTACCTCA ACGGTTTTAG CGAAAACGTA
AAAGAGATTG TTGAGTGTTT TAACCTGAAA GCCCAAATCC GTCACATGGC AGGGAAAGAC
GTTCTGCTAG ATGTGGTTGA GAAATTCGTC TCGCCGTACA TCAACTTAAC GCCAGCGGTT
AAAGAAGATC CTGAGGGTAA CAAACTACCA GCACTCAGCA ACCTTGGTAT GGGCTATGTA
TTTGAAGAAT TGATTCGTAA GTTCAACGAA GAGAACAACG AAGAGGCGGG GGAGCACTTT
ACTCCGCGTG AAGTGATCGA GCTGATGACG CACCTTGTTT TCGATCCAAT CAAAGATAAC
TTGCCACTTT CTATCACAGT GTATGACCCA GCATGTGGTA GTGGCGGTAT GCTGACAGAA
ACGCAAAACT TTGTTGAAGA GAAATACCCA GCATCAAACC GTGATATCTA CCTTTACGGT
AAAGAGATCA ACGATGAGAC TTACGCTATC TGTAAGTCAG ATATGATGAT CAAAGGTAAC
AACCCAGAAA ACATCCGTGT AGGTTCAACC CTTTCCACTG ACGAATTCTC ATCTAATCGC
TTCGATTTCA TGCTCTCTAA CCCGCCTTAT GGTAAGAGCT GGGCGAGTGA GCAAAAGCAC
ATCAAAGAAG GCAAAGAAGT CGTTGATGGT CGCTTTAAAG TGAAGTTAAA AGATTACTGG
GGTGTAGAGA GCGAGCAAGA AGCGATACCA CGCTCAAGTG ATGGCCAGTT ACTGTTCCTG
ATGGAAATGG TCACCAAAAT GAAGTCGCCG CAAGACAGCC CATTGGGTTC ACGCATTGCG
TCCGTTCACA ATGGTTCAAG CTTGTTTACC GGTGATGCGG GTAGTGGTGA AAGTAATATT
CGTCGTTTCA TCATAGAAAA TGACATGCTG GATGCGATTG TTCAGTTGCC AAACAACCTG
TTCTACAACA CGGGTATTAC CACGTACATC TGGCTGCTCA ATAACAACAA ACCTGAAAAT
CGCCAAGGCA AAGTGCAGCT GATTGATGCT AGCTTACTGT TCCGTAAGTT GCGTAAGAAC
TTGGGTAATA AAAACTGCGA ATTTTCGCCA GAGCACATTG CGGAAATTGT CTCGACCTAT
CTTGAGAATC AATCTGTTGA ACGTGCTATT GATGAGAAAG GCGATCCGGT CGGTATTGCC
GCGCAAGTAT TCAAGAACCA AGATTTTGGT TACTACAAAG TCAATATTGA GCGCCCAGAT
CGCCGAAATG CCCAATTCCG CGCTGACTTA ATTGAGCCGT TACGTTTTGA AAACTCACAG
CGTGAAGTCA TGGAGTACTT GTACGCCGAA TATGGCGAGC AAGTCTATGA CGCAGGTTTT
GTTAAAGGGA TTGAAAAAGA GATCACCAAG TGGTGTGAAG AAAATGATAT CAGCCTAAAC
AAAGCGGCAA AAACCAAGTT GCTGGATACG AAAAACTGGA TTAAACAACG CACACTGGTG
AATGTAGCGA GTCAATTACA CAAAAAGATC GGTGACGAAG TTTACAACGA CTTTAACCAG
TTCAAACAAT TAGTAGATGC AGAACTTACA TCACTCGGCC TTAAGCTTTC AGCACCAGAA
AAGAAAGCCA TCTTGGATGC GGTAAGCTGG TATGACGAAA ATGCAGAAAA AGTCATCAAG
AAAGTCGCCA AGCTAAAGCA AGATAAGTTA GACGAACTGC TAGAAAACTA CGAATGTGAA
CTGCAAGATT TGCCAGATTT CGGGTACTAC CCAACGGGCA ACCACAACGA GTTCGTGACT
TATGAATCAA GTTCAGACTT GCGTGATAGC GAATCCGTTC CACTTGAGCA AAGCATTTAC
CAATACTTCC TTGATGAAGT AAAGCCGCAT GTAGATGAAG CTTGGATAAA TCTTGAATCA
GTCAAGATTG GTTATGAGAT CAGCTTTAAC AAGTACTTCT ATCGCCATAA GCCACTGCGC
TCAATGGATG AGGTCGCTGG TGACATTATT GCGCTTGAAC AAAAAGCGGA AGGCTTAATT
GCTGACATTT TGGGCATCTC TGTGGCTAAG GTTCAGGGGT AA
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| Protein sequence | MDHSVHNKLV SFIWSIADDC LRDVYVRGKY RDVILPMVVL RRLDTLLEPS KEAVLEEVRF
QKEEMNEIEL DDAPLCATSG YVFYNTSKWT LQTLFSTATN NQQILLANFE DYLNGFSENV
KEIVECFNLK AQIRHMAGKD VLLDVVEKFV SPYINLTPAV KEDPEGNKLP ALSNLGMGYV
FEELIRKFNE ENNEEAGEHF TPREVIELMT HLVFDPIKDN LPLSITVYDP ACGSGGMLTE
TQNFVEEKYP ASNRDIYLYG KEINDETYAI CKSDMMIKGN NPENIRVGST LSTDEFSSNR
FDFMLSNPPY GKSWASEQKH IKEGKEVVDG RFKVKLKDYW GVESEQEAIP RSSDGQLLFL
MEMVTKMKSP QDSPLGSRIA SVHNGSSLFT GDAGSGESNI RRFIIENDML DAIVQLPNNL
FYNTGITTYI WLLNNNKPEN RQGKVQLIDA SLLFRKLRKN LGNKNCEFSP EHIAEIVSTY
LENQSVERAI DEKGDPVGIA AQVFKNQDFG YYKVNIERPD RRNAQFRADL IEPLRFENSQ
REVMEYLYAE YGEQVYDAGF VKGIEKEITK WCEENDISLN KAAKTKLLDT KNWIKQRTLV
NVASQLHKKI GDEVYNDFNQ FKQLVDAELT SLGLKLSAPE KKAILDAVSW YDENAEKVIK
KVAKLKQDKL DELLENYECE LQDLPDFGYY PTGNHNEFVT YESSSDLRDS ESVPLEQSIY
QYFLDEVKPH VDEAWINLES VKIGYEISFN KYFYRHKPLR SMDEVAGDII ALEQKAEGLI
ADILGISVAK VQG
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