| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1350 |
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| Symbol | |
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| ID | 5135552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1438783 |
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| End bp | 1439661 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532808 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217294 |
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| Protein GI | 147675699 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.136839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTATTTT CAATTGTTCG TCACTGGTCA AATTCGCTGG TCAACTGGCT GGCAAGTAAT
GCGGTTCAAC ACCTATTCCA ACTCTTTATC TTTTTATTGA TTCTACTGGC GGCGAAGGGC
GGAGCGAAAG TGACTCGCAC TGTAGTACGT TCTGCTGTGA ACTCGAAAAA CATCCGTATC
TCTCATTTGA TGCAGGATTT CTTTGTTTCT ATGTCCGGCA AAGTAGTGTG GGTTATCGGG
ATTTTGGTCG GCTTATCGCA GATTGGTCTC AATCTCGCGC CAGTATTAAC CGGTTTTGGT
ATTGCAGGGG TGATCATTGG TTTCGCGTTG CAAGATACTT TGTCTAACTT CGCAGCAGGC
ATGATGTTAC TGATTTACCG ACCATTTGAT GTGGGGGATT TTGTGCATGC GGGAGGTGTG
GATGGCAAAG TGAGCCACAT GAGTTTGGTC AATACCACGA TTCGTACGTT CGATAACCAG
ATCATTATTG TGCCCAATAG CAAAATTTGG GGGGATGTGA TCAAAAACGT TACCCATGAA
CGGATCCGAC GAGTCGATAT GGTGTTTGGC ATTGGGTATA GCGATGATTT GCTTAAAGCA
GAAGCAGTAC TGACCGATAT CGTAAAGTCG CATCCCGCAG TGCTAAAAAC ACCTGAGCCG
AATATCAAAG TGCATACGCT TAACACCTCA TCGATTGACT TTATCGTGCG TCCTTGGGTG
AAAACCGACG ATTACTGGGA TGTGTATTGG GATGTCACTA AAGAAGTTAA GCTGCGCTTT
GACCGGGAAG GTATTTCTAT TCCTTTCCCA CAACAAGATG TGCATTTGCA TCTGGTGGAT
CAAAAAGCCT TTATCCCACC TACACAGCCC ACTTCTTAG
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| Protein sequence | MVFSIVRHWS NSLVNWLASN AVQHLFQLFI FLLILLAAKG GAKVTRTVVR SAVNSKNIRI
SHLMQDFFVS MSGKVVWVIG ILVGLSQIGL NLAPVLTGFG IAGVIIGFAL QDTLSNFAAG
MMLLIYRPFD VGDFVHAGGV DGKVSHMSLV NTTIRTFDNQ IIIVPNSKIW GDVIKNVTHE
RIRRVDMVFG IGYSDDLLKA EAVLTDIVKS HPAVLKTPEP NIKVHTLNTS SIDFIVRPWV
KTDDYWDVYW DVTKEVKLRF DREGISIPFP QQDVHLHLVD QKAFIPPTQP TS
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