| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1340 |
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| Symbol | |
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| ID | 5136928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1428630 |
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| End bp | 1430912 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640532798 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_001217284 |
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| Protein GI | 147674587 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.920071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCTC TACGCAGAAA ATGGATCAGC GATCCCGCTT TCAAAATGTT TAAGAAAGTG
CTTCCTCCTC TGTCACAAAC CGAGAAAGAA GCGATGGAAG CGGGCAGTGT ATGGTGGGAT
GGCGAACTGT TCTCTGGTAA GCCTGATTTC ACCAAGCTGC ACCATTATCC GAAACCGACC
TTGTCAGCGG AGGAGCAATC TTTCATCGAC AACGAGTTGG AAACTCTGCT CGCTATGTTG
GATGACTACA AGATAGTCAA ACAAGATCGC GATCTCCCCA AAGAGGTGTG GGACTACCTA
CGTAAAGAGC GTTTCTTCTC GCTGATTATT TCCAAAGAGT ATGGTGGCCG TGAGTTCTCG
GCTCTGGCGA ACTCGACCAT AGTGTCACGC ATTGCTACGC GCAGCATCAG CACCGCAGTA
ACAGTCATGG TACCGAACTC ATTGGGCCCT GGTGAGCTGT TGTCACACTA CGGTACCCAA
GAGCAGAAAG ATTACTGGCT GCCACGTTTG GCCGATGGCA CCGATATTCC TTGCTTTGCA
TTGACAGGGC CGGAAGCGGG TTCGGATGCG GGCAGCATTC CTGACCAAGG CGTGGTCTGC
TACGGCAAGC ATGAAGGCAA AGACGTGCTG GGCATCCGTT TAAGCTGGAA CAAGCGTTAC
ATCACGCTGG CACCAGTGGC GACTGTGCTG GGTCTTGCTT TCAAACTGAG TGATCCAGAG
CATCTGCTTG GCGATAAAGA AGAGATTGGT ATTACTTGTG CGCTAATCCC TGCCTCCCAT
GAAGGCGTAG AGATTGGCGA ACGCCACGAC CCACTAGGTT TGGCCTTTAT GAACGGCCCA
ACCCGTGGCC AAGATGTGTT TATCCCAATG GATTGGCTGA TTGGTGGGGC GGATTACGCA
GGTAAAGGCT GGCGCATGTT GGTGGAGTGT CTCTCGGCAG GACGTGGGAT CTCCCTACCT
GCATTGGGTA CCGCGATTGG CCACCTCACC GCTCGTACCA CAGGCGCATA TGGTTATGTG
CGTAAGCAGT TTGGGATGTC GATTGGTAAA TTTGAAGGTG TGGCGGAAGC CATGGGACGT
ATCGGCGGTT TAACCTACTT GCTGGAAGCG ACCCGTACTT TGACCACCAC CTCTTTGGAT
CTCAAAGAGA AACCAGGGAT TGTCACGGCG ATTGCCAAAT ACCACATGAC GGAAATCGCG
CGCACCATTT TGAATGATGC GATGGATATC CATTCTGGTC GTGCTATCCA AGATGGACCA
ATGAACTATC TGGCGACGCA CTATCTCGGC GTACCCGTGG CAATCACGGT TGAAGGGGCG
AACATTTTGA CGCGTAACCT GATGATCTTC GGTCAAGGTG CGACTCGTTG CCATCCTTAT
GTTCTCAAAG AGATGGAAGC GGCGGCCAAC CCAGATCAAC AAGAAGGGGC AAAAGCGTTT
GATGAACTGC TGTTCAAGCA CATTGCCCAC GCGACCAAAA ACAGCTTTGG TGCTCTGTTT
GCCGCACTGA CGGGTTCACG CTTTATTAAA GCGAACATGA GTGGCCCCAC ACAAGACTAC
TATAAGCAGA TGACTCGCCT GAGCCGCGCT TTAGCGGTGA GTGCGGATGT GGCAATGCTC
ACCTTGGGTG GCGAGCTCAA ACGTAAAGAG ATGATTTCAG CACGCTTAGG CGATGCACTG
AGCTATCTGT ACATGGGCTC GGCGGTACTG AAAAAGTATG AAGATGAAGG CCGCCATCAA
GCGGATTTAG ACTACGTACA CTATGCGATG CAGTACTGTT TACATCACGC GGCGAAATCG
CTTAACCAAG CGTATCGTAA CTACCCTGTG ACTGGGGTCG GAGCCATCTT GAAAGGGCTG
CTGTTCCCGC TAGGCAACCA CTTTGCACCA CCGAGTGATG AGTTAGCGGT CAAACTCGCA
GAAAGTCTGA TGACCCCTGG AGCGCATCGT GATCGTTTAA CCGCGCTGTG CTACATAGGT
AAAGGTGAAG ATGACAGCGT AGGCTTGATG GAAAAAGCGT TTTTGGCCAT GTATAGCGTT
AAAGGCTTAG AGCGTAAACT GCAACAAGGG GTGAAAGAGG GTAAAGTGGC GCGCAAAGGA
CTACTGGTTG ATCGCTTGGC ACAAGCAGAG CAAGCGGATG TGTTGAGCGC AGATGAAGTG
GCCTCGATTC TGGCGGCAGA AAAACTGCGT AGCCGTGCGA TTCAGGTCGA TCATTTCAGC
CATGATTTCT CGCAAATCCA TACCCATCAG ACCACCAAAC CTAAGTTAAA CAGTGTGGCG
TAA
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| Protein sequence | MSSLRRKWIS DPAFKMFKKV LPPLSQTEKE AMEAGSVWWD GELFSGKPDF TKLHHYPKPT
LSAEEQSFID NELETLLAML DDYKIVKQDR DLPKEVWDYL RKERFFSLII SKEYGGREFS
ALANSTIVSR IATRSISTAV TVMVPNSLGP GELLSHYGTQ EQKDYWLPRL ADGTDIPCFA
LTGPEAGSDA GSIPDQGVVC YGKHEGKDVL GIRLSWNKRY ITLAPVATVL GLAFKLSDPE
HLLGDKEEIG ITCALIPASH EGVEIGERHD PLGLAFMNGP TRGQDVFIPM DWLIGGADYA
GKGWRMLVEC LSAGRGISLP ALGTAIGHLT ARTTGAYGYV RKQFGMSIGK FEGVAEAMGR
IGGLTYLLEA TRTLTTTSLD LKEKPGIVTA IAKYHMTEIA RTILNDAMDI HSGRAIQDGP
MNYLATHYLG VPVAITVEGA NILTRNLMIF GQGATRCHPY VLKEMEAAAN PDQQEGAKAF
DELLFKHIAH ATKNSFGALF AALTGSRFIK ANMSGPTQDY YKQMTRLSRA LAVSADVAML
TLGGELKRKE MISARLGDAL SYLYMGSAVL KKYEDEGRHQ ADLDYVHYAM QYCLHHAAKS
LNQAYRNYPV TGVGAILKGL LFPLGNHFAP PSDELAVKLA ESLMTPGAHR DRLTALCYIG
KGEDDSVGLM EKAFLAMYSV KGLERKLQQG VKEGKVARKG LLVDRLAQAE QADVLSADEV
ASILAAEKLR SRAIQVDHFS HDFSQIHTHQ TTKPKLNSVA
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