Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1340 |
Symbol | |
ID | 5136928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1428630 |
End bp | 1430912 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640532798 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001217284 |
Protein GI | 147674587 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.920071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCTC TACGCAGAAA ATGGATCAGC GATCCCGCTT TCAAAATGTT TAAGAAAGTG CTTCCTCCTC TGTCACAAAC CGAGAAAGAA GCGATGGAAG CGGGCAGTGT ATGGTGGGAT GGCGAACTGT TCTCTGGTAA GCCTGATTTC ACCAAGCTGC ACCATTATCC GAAACCGACC TTGTCAGCGG AGGAGCAATC TTTCATCGAC AACGAGTTGG AAACTCTGCT CGCTATGTTG GATGACTACA AGATAGTCAA ACAAGATCGC GATCTCCCCA AAGAGGTGTG GGACTACCTA CGTAAAGAGC GTTTCTTCTC GCTGATTATT TCCAAAGAGT ATGGTGGCCG TGAGTTCTCG GCTCTGGCGA ACTCGACCAT AGTGTCACGC ATTGCTACGC GCAGCATCAG CACCGCAGTA ACAGTCATGG TACCGAACTC ATTGGGCCCT GGTGAGCTGT TGTCACACTA CGGTACCCAA GAGCAGAAAG ATTACTGGCT GCCACGTTTG GCCGATGGCA CCGATATTCC TTGCTTTGCA TTGACAGGGC CGGAAGCGGG TTCGGATGCG GGCAGCATTC CTGACCAAGG CGTGGTCTGC TACGGCAAGC ATGAAGGCAA AGACGTGCTG GGCATCCGTT TAAGCTGGAA CAAGCGTTAC ATCACGCTGG CACCAGTGGC GACTGTGCTG GGTCTTGCTT TCAAACTGAG TGATCCAGAG CATCTGCTTG GCGATAAAGA AGAGATTGGT ATTACTTGTG CGCTAATCCC TGCCTCCCAT GAAGGCGTAG AGATTGGCGA ACGCCACGAC CCACTAGGTT TGGCCTTTAT GAACGGCCCA ACCCGTGGCC AAGATGTGTT TATCCCAATG GATTGGCTGA TTGGTGGGGC GGATTACGCA GGTAAAGGCT GGCGCATGTT GGTGGAGTGT CTCTCGGCAG GACGTGGGAT CTCCCTACCT GCATTGGGTA CCGCGATTGG CCACCTCACC GCTCGTACCA CAGGCGCATA TGGTTATGTG CGTAAGCAGT TTGGGATGTC GATTGGTAAA TTTGAAGGTG TGGCGGAAGC CATGGGACGT ATCGGCGGTT TAACCTACTT GCTGGAAGCG ACCCGTACTT TGACCACCAC CTCTTTGGAT CTCAAAGAGA AACCAGGGAT TGTCACGGCG ATTGCCAAAT ACCACATGAC GGAAATCGCG CGCACCATTT TGAATGATGC GATGGATATC CATTCTGGTC GTGCTATCCA AGATGGACCA ATGAACTATC TGGCGACGCA CTATCTCGGC GTACCCGTGG CAATCACGGT TGAAGGGGCG AACATTTTGA CGCGTAACCT GATGATCTTC GGTCAAGGTG CGACTCGTTG CCATCCTTAT GTTCTCAAAG AGATGGAAGC GGCGGCCAAC CCAGATCAAC AAGAAGGGGC AAAAGCGTTT GATGAACTGC TGTTCAAGCA CATTGCCCAC GCGACCAAAA ACAGCTTTGG TGCTCTGTTT GCCGCACTGA CGGGTTCACG CTTTATTAAA GCGAACATGA GTGGCCCCAC ACAAGACTAC TATAAGCAGA TGACTCGCCT GAGCCGCGCT TTAGCGGTGA GTGCGGATGT GGCAATGCTC ACCTTGGGTG GCGAGCTCAA ACGTAAAGAG ATGATTTCAG CACGCTTAGG CGATGCACTG AGCTATCTGT ACATGGGCTC GGCGGTACTG AAAAAGTATG AAGATGAAGG CCGCCATCAA GCGGATTTAG ACTACGTACA CTATGCGATG CAGTACTGTT TACATCACGC GGCGAAATCG CTTAACCAAG CGTATCGTAA CTACCCTGTG ACTGGGGTCG GAGCCATCTT GAAAGGGCTG CTGTTCCCGC TAGGCAACCA CTTTGCACCA CCGAGTGATG AGTTAGCGGT CAAACTCGCA GAAAGTCTGA TGACCCCTGG AGCGCATCGT GATCGTTTAA CCGCGCTGTG CTACATAGGT AAAGGTGAAG ATGACAGCGT AGGCTTGATG GAAAAAGCGT TTTTGGCCAT GTATAGCGTT AAAGGCTTAG AGCGTAAACT GCAACAAGGG GTGAAAGAGG GTAAAGTGGC GCGCAAAGGA CTACTGGTTG ATCGCTTGGC ACAAGCAGAG CAAGCGGATG TGTTGAGCGC AGATGAAGTG GCCTCGATTC TGGCGGCAGA AAAACTGCGT AGCCGTGCGA TTCAGGTCGA TCATTTCAGC CATGATTTCT CGCAAATCCA TACCCATCAG ACCACCAAAC CTAAGTTAAA CAGTGTGGCG TAA
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Protein sequence | MSSLRRKWIS DPAFKMFKKV LPPLSQTEKE AMEAGSVWWD GELFSGKPDF TKLHHYPKPT LSAEEQSFID NELETLLAML DDYKIVKQDR DLPKEVWDYL RKERFFSLII SKEYGGREFS ALANSTIVSR IATRSISTAV TVMVPNSLGP GELLSHYGTQ EQKDYWLPRL ADGTDIPCFA LTGPEAGSDA GSIPDQGVVC YGKHEGKDVL GIRLSWNKRY ITLAPVATVL GLAFKLSDPE HLLGDKEEIG ITCALIPASH EGVEIGERHD PLGLAFMNGP TRGQDVFIPM DWLIGGADYA GKGWRMLVEC LSAGRGISLP ALGTAIGHLT ARTTGAYGYV RKQFGMSIGK FEGVAEAMGR IGGLTYLLEA TRTLTTTSLD LKEKPGIVTA IAKYHMTEIA RTILNDAMDI HSGRAIQDGP MNYLATHYLG VPVAITVEGA NILTRNLMIF GQGATRCHPY VLKEMEAAAN PDQQEGAKAF DELLFKHIAH ATKNSFGALF AALTGSRFIK ANMSGPTQDY YKQMTRLSRA LAVSADVAML TLGGELKRKE MISARLGDAL SYLYMGSAVL KKYEDEGRHQ ADLDYVHYAM QYCLHHAAKS LNQAYRNYPV TGVGAILKGL LFPLGNHFAP PSDELAVKLA ESLMTPGAHR DRLTALCYIG KGEDDSVGLM EKAFLAMYSV KGLERKLQQG VKEGKVARKG LLVDRLAQAE QADVLSADEV ASILAAEKLR SRAIQVDHFS HDFSQIHTHQ TTKPKLNSVA
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