| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1334 |
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| Symbol | aroA |
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| ID | 5136275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1423637 |
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| End bp | 1424917 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532792 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001217278 |
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| Protein GI | 147673856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000221059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCT TGACTCTACA ACCGATTGAA CTCATCTCTG GGGAAGTGAA TCTTCCCGGT
TCCAAAAGCG TTTCAAACCG TGCGCTCTTG CTGGCTGCGC TAGCCTCAGG CACGACTCGT
CTTACTAACT TGCTCGATAG CGACGATATT CGCCATATGC TCAATGCTTT GACCAAGCTG
GGTGTGAACT ATCGCCTCTC GGCCGATAAA ACCACCTGTG AAGTAGAAGG TTTGGGCCAA
GCCTTTCACA CGACTCAGCC ATTAGAGCTG TTTCTAGGTA ACGCAGGTAC TGCAATGCGT
CCGCTGGCGG CGGCGTTGTG TCTTGGACAA GGCGACTATG TACTGACTGG CGAACCGCGC
ATGAAAGAGC GCCCGATTGG CCACTTAGTG GATGCTCTTC GTCAAGCCAG CGCACAGATT
GAGTATCTGG AGCAGGAAAA CTTTCCTCCA CTGCGTATTC AAGGGACGGG CTTACAAGCA
GGAACGGTGA CTATCGATGG TTCTATCTCT AGTCAGTTTT TGACCGCCTT TCTTATGTCG
GCACCGTTGG CGCAGGGCAA AGTGACCATC AAGATCGTCG GTGAGCTGGT TTCTAAGCCT
TACATCGACA TTACACTGCA CATCATGGAG CAGTTTGGTG TTCAGGTGAT CAACCACGAT
TATCAAGAAT TTGTGATCCC AGCGGGGCAA TCTTATGTGT CTCCGGGGCA GTTCCTCGTC
GAAGGTGATG CCTCTTCTGC TTCCTATTTC CTTGCTGCGG CTGCCATTAA AGGCGGTGAG
GTAAAAGTGA CCGGTATTGG TAAAAACAGC ATCCAAGGGG ATATTCAATT TGCGGATGCA
TTAGAAAAGA TGGGCGCGCA AATTGAGTGG GGCGATGATT ATGTGATTGC TCGCCGTGGT
GAACTGAATG CGGTGGATCT CGATTTTAAC CATATCCCAG ATGCGGCGAT GACGATTGCG
ACGACGGCAC TTTTTGCCAA AGGTACCACG GCCATTCGTA ACGTTTACAA CTGGCGTGTA
AAAGAGACGG ATCGCTTGGC AGCAATGGCC ACCGAACTGC GTAAAGTGGG CGCGACAGTC
GAAGAGGGGG AAGATTTCAT TGTGATTACG CCTCCAACTA AGCTCATCCA TGCGGCAATC
GATACCTATG ACGATCACCG GATGGCGATG TGTTTTTCTC TGGTTGCGTT GAGCGATACA
CCAGTGACGA TCAATGACCC GAAATGCACG TCAAAAACGT TCCCCGATTA CTTTGATAAG
TTTGCGCAAT TAAGCCGCTA A
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| Protein sequence | MESLTLQPIE LISGEVNLPG SKSVSNRALL LAALASGTTR LTNLLDSDDI RHMLNALTKL
GVNYRLSADK TTCEVEGLGQ AFHTTQPLEL FLGNAGTAMR PLAAALCLGQ GDYVLTGEPR
MKERPIGHLV DALRQASAQI EYLEQENFPP LRIQGTGLQA GTVTIDGSIS SQFLTAFLMS
APLAQGKVTI KIVGELVSKP YIDITLHIME QFGVQVINHD YQEFVIPAGQ SYVSPGQFLV
EGDASSASYF LAAAAIKGGE VKVTGIGKNS IQGDIQFADA LEKMGAQIEW GDDYVIARRG
ELNAVDLDFN HIPDAAMTIA TTALFAKGTT AIRNVYNWRV KETDRLAAMA TELRKVGATV
EEGEDFIVIT PPTKLIHAAI DTYDDHRMAM CFSLVALSDT PVTINDPKCT SKTFPDYFDK
FAQLSR
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