Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1324 |
Symbol | |
ID | 5137382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1412633 |
End bp | 1413643 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532782 |
Product | LacI family transcription regulator |
Protein accession | YP_001217268 |
Protein GI | 147673764 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0131249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACGA TTAAAGATGT GGCGCGCCTT GCGGGCGTGT CAACCACTAC CGTTTCTCAC GTCATCAATA AAACTCGCTT TGTGGCAGAA ACCACCCAAG AGAAAGTGAT GGAAGCCGTT AAGCAGCTGA ACTACGCGCC AAGTGCCGTG GCACGCAGCT TAAAGTGCAA TACCACTCGC ACGATTGGTA TGTTAGTGAC GCAATCTACT AACCTGTTTT TCTCGGAAGT TATCGACGGT GTGGAAAGCT ATTGTTACCG TCAAGGCTAT ACGCTGATCC TATGTAACAC AGGCGGCATC TATGAAAAGC AACGCGATTA TATCCGCATG CTGGCCGAAA AACGGGTTGA TGGCATTTTG GTGATGTGCT CAGACCTGAC CCAAGAGCTG CAAGATATGT TGGATGCGCA CAAAGATATT CCAAAAGTGG TTATGGATTG GGGTCCAGAA ACGTCGCACG CCGATAAAAT CATCGATAAC TCCGAAGAAG GCGGCTACCT CGCGACCAAA TACCTCACTG ACCGCGGTCA CACTGAGATT GCATGTTTGA GTGGTCACTT CGTCAAAGCC GCATGCCAAG AGCGCATTCA AGGTTTCCGT CGCGCGATGG CGGAAGCCAA GTTGACCGTC AATGAAGATT GGATCTTGGA AGGTAACTTT GAGTGTGATA CTGCCGTTTT AGCGGCGGAT AAAATCATTG CGATGGACAA GCGCCCCACG GCGGTATTCT GTTTCAACGA TACGATGGCA TTAGGTTTGA TGAGCCGTTT GCAACAGAAA GGGATACGTA TTCCAGAAGA TATGTCTGTC ATCGGTTACG ATAATATCGA GTTAGCAGAA TACTTCTCTC CACCACTGAC CACAGTGCAC CAACCTAAGC GTCGTGTGGG TAAGAACGCG TTTGAAATTT TGCTAGAACG CATTAAAGAC AAAGAACACG AGCGCCGAAT TTTCGAAATG CACCCAGAGA TCGTAGAGCG CGACACGGTG AAAGACTTGA CAAAATCCTA A
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Protein sequence | MATIKDVARL AGVSTTTVSH VINKTRFVAE TTQEKVMEAV KQLNYAPSAV ARSLKCNTTR TIGMLVTQST NLFFSEVIDG VESYCYRQGY TLILCNTGGI YEKQRDYIRM LAEKRVDGIL VMCSDLTQEL QDMLDAHKDI PKVVMDWGPE TSHADKIIDN SEEGGYLATK YLTDRGHTEI ACLSGHFVKA ACQERIQGFR RAMAEAKLTV NEDWILEGNF ECDTAVLAAD KIIAMDKRPT AVFCFNDTMA LGLMSRLQQK GIRIPEDMSV IGYDNIELAE YFSPPLTTVH QPKRRVGKNA FEILLERIKD KEHERRIFEM HPEIVERDTV KDLTKS
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