| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1313 |
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| Symbol | |
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| ID | 5136840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1395853 |
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| End bp | 1398309 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532771 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217257 |
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| Protein GI | 147675480 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTGA ATGTATCAAC CGTACAACCA CAAAGTATCG GCTTACAAAC TCGTTATGCA
CCACTCGATT GGTGTTACCA GTTAGCCAGT CAGCATATGG ATTACGATGT TGTGATGTGG
CAGTCACTGG TGGGAAATTC TCGCTCGATT ACCAAGCCCG ACGATTTTCT TGAGTACTTG
CCTTTGACTC AGCGCGAGCA TGCCGCGGGC TTTTTCGTAC AAGCAGATTC AGCGCCACAG
AGTCTCAATA CCTTATTGGT GAGCGCCGAA AAGCTGGTGG CCTTAGTCGC GTTTTCGGTT
GACGAAGTGA GTAGCCAGCT TGTTCGAGGG ACGATTACGC CATTACTGAT TTTCCATTCT
GGCATGGAAT CCGCCTTTGC ATTTGATGCT TTATTTGATA ATGACCATCA TGGGGTTGTG
ATTACCGATG ATCAAACGCG AATTTTGGCG TGTAATCGTT ATTTTGAGCA GCAAACGGGA
TATCAACAAA ATGAGCTACT GGGGTTAAAA ACCAGTATGT TCAATTCGGG CAAACATTCG
CAGCATTTCT ATGTGGATAT GTGGCAGCAA TTGCGTGAGC AAGGCGGCTG GAGCGGCACG
ATTTTATCTC AGCGCGCTTC TGGTGACGTC TGGCCACAAG ACCTGTCCAT TAAACGTTTA
AGTCCTCAGA AAGGGCAGAT CTTTTATATC GGTTTTACCA CGGATCTGGC ACCGCATTTG
GATCGCGTAC TGGATAAGCA AGCGGGCGAT GTCGAATTGC TGACACAATT ACCGACGCTG
TCTAAATTCA GTGATCAGTT GAAACAGCGT TTACCTAAGT ATCAAACCAC CACTGGATTT
GTGTTGGCGA TACAGCCTAA ATTCAGCAGC GATAAATACT ATGCGCAGAT CCGCCGGCTG
GCTGCCAGTT TGGCGCAGAA CCGGCAAGTG CAACTGTGTG GTTATCACGG TGAAGGGATT
TTTCTGTGTC AGTTGGATGC GGAGAAAAAC CTAGAAGCTC AGCCTTTGGT AGGGTTACAG
CGCACTTTAC GCCAGTTTTT TATTGAGTTA CGACAACGAG GTGGGCAGGA AGCTCATCAA
GCCGTTGCTA AGGGGCGTTT AGGGGTTTCG GTGTTAAATG TGGATACCGA TAAAATAGAG
CGCCTCGTTC CCCATGCCAT CCAAGCCATG TTGGAGCACC ACGCGGGGGA AACTCGACAT
ATCAACTTTT ATGATCGCGC AATCCATCAG CAGATTGAGC GTCGTAAAAC ACTGGAAAAA
TGGGTGCAGA AATGGATAGC AAATGGCGAT GTCGAAGTGT TTTATCAGCC CATTGTGGAT
AGCCAGAGTT GGTCTGTGGT GAAGTTTGAG GCGCTGTGCC GTTTTCAAGC TCCTGAGATT
TTGCATGCAT CAACGCAAGA GTTAATTTCG ATAGCCGAAG AGCTGGGGCT GATCAATCAG
TTGGATGAGT TGATTGGCGG CAAAGCCTTA AAGGATCTGC CTAAAATTCA CGCCTTATTT
GGTCACCATG TGGGAGTCAG CATCAATCGT TCGTTAAACA GCGACTTGAG TGCTGAGCAG
ATTTTACAAA GCGTGGTTGA CATGCTCGCT GAAACGCCGA CTTTGGCGAA AAATATCACG
GTGGAGTTAA CGGAAACGGC TTACTTTGAC TCTCAATCAC AGGGAGGCGA AGTGCTGCAG
CATTTACGAA ATCGTGGCGT CACTGTTGCG ATTGATGATT TTGGAACGGG CTTTTCTTCG
TTCTCTTACC TCACGGAGTG TCAGTTTGAT TATTTGAAAA TCGATCGAGA GTTTGTGACC
AATATCGAAG TGGGGTCACG CCGCTATGCC ATCGTAAAAA TGATGACCGA TCTTGCCCAT
ACTTTGGGTG TTAAGGTTGT CGCCGAAGGG GTAGAGACTG AGCATGAAGT GTATGTCCTC
AAGTCGCTGG GGGTAGATCT ATTACAGGGA TTCTTTTTCG CCAAGCCTTT GCCACTGAGT
AACCTTATTC ATGCCTCGGA TTATCGTAAA CATCTTAAGC TGACCAACCG TGAAGCCGAT
AAGCAATCAA GCGAAATTAC AACACTGCAA AGTTTAGCGT TTTTCACTCA ATATCGGCTC
GACCCAGGAG ATCCACTCTC GTTGGCGGTG GAATACTTTA ACGCGGTGCA GTCCGATGTT
TTACCGGTCG TTACGGCTGG AGAATGTGTC GGCTTGGTGG ATAGAGCCGC GTTGAATTTA
CACCTCACGC CGACGATGGG CACTGAATTG GAAACGGCAC GTGAAGCCGC TATTTGGCGC
AAACCCGTCA ATCAAATCAT GCGCACGCCG CAAGTCAAAC TGGCTCATGA TACAGACCTC
AAGCTATTAG CCTCGTTGCT CAAAACTAAT CCACCGCCAC CTTGGGTTTT AGTCGAGGGT
AATAAATACA AAGGGATTGT GACTGCGCCG CGTCTGCTCG CTTATTTAGC GAGTTGA
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| Protein sequence | MSVNVSTVQP QSIGLQTRYA PLDWCYQLAS QHMDYDVVMW QSLVGNSRSI TKPDDFLEYL
PLTQREHAAG FFVQADSAPQ SLNTLLVSAE KLVALVAFSV DEVSSQLVRG TITPLLIFHS
GMESAFAFDA LFDNDHHGVV ITDDQTRILA CNRYFEQQTG YQQNELLGLK TSMFNSGKHS
QHFYVDMWQQ LREQGGWSGT ILSQRASGDV WPQDLSIKRL SPQKGQIFYI GFTTDLAPHL
DRVLDKQAGD VELLTQLPTL SKFSDQLKQR LPKYQTTTGF VLAIQPKFSS DKYYAQIRRL
AASLAQNRQV QLCGYHGEGI FLCQLDAEKN LEAQPLVGLQ RTLRQFFIEL RQRGGQEAHQ
AVAKGRLGVS VLNVDTDKIE RLVPHAIQAM LEHHAGETRH INFYDRAIHQ QIERRKTLEK
WVQKWIANGD VEVFYQPIVD SQSWSVVKFE ALCRFQAPEI LHASTQELIS IAEELGLINQ
LDELIGGKAL KDLPKIHALF GHHVGVSINR SLNSDLSAEQ ILQSVVDMLA ETPTLAKNIT
VELTETAYFD SQSQGGEVLQ HLRNRGVTVA IDDFGTGFSS FSYLTECQFD YLKIDREFVT
NIEVGSRRYA IVKMMTDLAH TLGVKVVAEG VETEHEVYVL KSLGVDLLQG FFFAKPLPLS
NLIHASDYRK HLKLTNREAD KQSSEITTLQ SLAFFTQYRL DPGDPLSLAV EYFNAVQSDV
LPVVTAGECV GLVDRAALNL HLTPTMGTEL ETAREAAIWR KPVNQIMRTP QVKLAHDTDL
KLLASLLKTN PPPPWVLVEG NKYKGIVTAP RLLAYLAS
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