| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1308 |
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| Symbol | metE |
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| ID | 5136950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1388244 |
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| End bp | 1390529 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532766 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001217252 |
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| Protein GI | 147675183 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000166944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGA CACACATTCT TGGTTATCCC TGCATTGGCG AAAAACGCGA ACTTAAATTT
GCTCTTGAAA AATACTGGCG TGGTGAGATT GACCAAGCGG CTTTGAAACA GGTCGGTAGT
CAAATTCGCC AACACAGCTG GGCATTGCAA AAAGAAGCTG GATTAGACTT TGTGACCGCG
GGTGACTTTG CTTGGTACGA CCACGTACTC ACCACCACAC TATTACTGGG CCATGTGCCT
AAGCGCCATA GCCACGGTTT TCCTGATTTA GATACTTTGT TCCGTGTCGG TCGTGGTCAG
TCACAAAATG CTTGTGGTTG TGGAACGGGT AGCGCGGCTT CTGATATGAC CAAGTGGTTC
AACACCAACT ATCACTACAT CGTTCCGGAG TTCAGCTCTC ACGATACGTT TAATGTGAGC
TGGCCACAAC TGTTTGAAGA GGTGAATGAA GCGCTGCAAG CGGGTCACGA TGTAAAACCT
GTGCTGCTTG GCCCAATCAG TTACCTCTAT TTAGGCAAAG AAGTGGAAGA GGGTTTTGAT
CGGTTAACGT TGTTGCCGCG TCTATTGACC GCTTACCAAG CGATTCTGAG CAAGCTGGCG
AAGCAGGGTG TGCAATGGGT ACAAATCGAT GAGCCTATTT TGGCGTTAGA GCTGGAACCC
CGTTGGCAAG AAGCATTTAA ACTGGCTTAT CAGGTGATCC GCGGTGACGT CAAACTGCTG
CTGACCACTT ACTTTGATTC AGTGTTAGAT ACGCTTGATA AGATAGTCGA ACTGCCTGTC
GATGGTTTGC ATGTGGATAT TTCGGCCGCT CCAGCGCAGC TCGAAACTAT TGTGAACCGC
TTGCCCTCCG ATTGGGTGCT TTCTGCGGGG GTCATTAATG GCCGTAACGT TTGGCGTGCA
GATTTGAGTG CCATTCTGGC TCGTCTACAA CCTGTAAAAA CCTTGCTGGG TGAGCGTTTG
TGGGTCGCCA GTTCCTGTTC ACTGCTGCAC AGCCCTGTCG ATCTGGATCT GGAAGGCGAT
CTGAGCGCAG AAACCCGCAG TTGGTTTGCG TTTGCCAAGC AGAAAGTGAC CGAAGTCGCC
TTGCTCGGCC GTGCTCTGGA GGGGGATGCC GCCGCAATTT TAGCGTGTGA TACCTACAGC
CAGCCAATTG TTGCGCGCAA ATCTTCTCAC ACGGTGAACA AGGCTTCTGT GCAAGCGCGT
ATCAACAATA TTACGGCGGC ATTGGCAGAG CGGAGTGCGC CTTATATTGA GCGTGCTCAT
CACCAAGCAG AAGTATTGGG TCTGCCTTTC TTACCGACCA CGACCATTGG CTCTTTCCCA
CAAACAGGAG AGATCCGTAC TGAGCGTAGT GCGTATCGCC AAGGCAAGCT GAGCGAGCAA
GAGTATGTGC AAGCACTGAA AGGTCATATT GCTGATGCGG TTAAACGCCA AGAAGCACTA
GGGTTAGATG TGCTGGTGCA TGGTGAAGCG GAACGTAACG ACATGGTGGA ATACTTTGCT
GAAAACCTCG CTGGTTTCCA AACCACGCAG TTTGGTTGGG TGCAGAGTTA CGGTTCACGC
TGCGTAAAAC CTGCGATTGT GGTGGCGGAT ATCGAACGTG AAAAACCGAT CACGGTAGAG
TGGTCAACTT ACGCGCAATC TCTAACTTCT AAGCAGATGA AAGGAATGTT GACGGGGCCT
GTGACCATTC TATGCTGGAC CTTCCCACGT GAAGACATCA GCCGCCAAGA GATTGCTCAG
CAATTAGCGT TGGCACTGCG TGATGAAGTG GCGGATTTGC AAGATGCAGG CATCAATATT
ATTCAAATTG ACGAACCCGC GATTCGTGAA GGTTTACCAC TGAAAAAACG CGATCATCAA
ACCTATTTAG ATTGGGCAGT GCAAGCGTTT AAGATTTCCG CGGGTAGCGC GCGTCCGGAA
ACGCAAATTC ATACCCATAT GTGTTACAGC GAATTCAACG AGATCATCGA ATCGGTTGCG
GCACTGGATG CCGACGTGAT CACCATTGAA ACATCGCGCT CCAACATGGA ACTGCTCAAA
GCGTTTGAAG AGTTTAACTA CCCGAACGAA ATTGGCCCAG GCGTGTACGA CATTCACTCA
CCGAACATTC CTGCACAAAC ATGGATTGAA GATCTGCTGC GCAAAGCAGC AGAAAAAATT
CCAGCACAGC GTTTGTGGGT CAACCCAGAT TGCGGTCTAA AAACCCGTAA CTGGCCAGAA
GTGGAAGCGG CACTCACCAA CATGGTGAAC GCAGCGAAAG CACTGCGCGC GGAATGGCAA
GCTTGA
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| Protein sequence | MTTTHILGYP CIGEKRELKF ALEKYWRGEI DQAALKQVGS QIRQHSWALQ KEAGLDFVTA
GDFAWYDHVL TTTLLLGHVP KRHSHGFPDL DTLFRVGRGQ SQNACGCGTG SAASDMTKWF
NTNYHYIVPE FSSHDTFNVS WPQLFEEVNE ALQAGHDVKP VLLGPISYLY LGKEVEEGFD
RLTLLPRLLT AYQAILSKLA KQGVQWVQID EPILALELEP RWQEAFKLAY QVIRGDVKLL
LTTYFDSVLD TLDKIVELPV DGLHVDISAA PAQLETIVNR LPSDWVLSAG VINGRNVWRA
DLSAILARLQ PVKTLLGERL WVASSCSLLH SPVDLDLEGD LSAETRSWFA FAKQKVTEVA
LLGRALEGDA AAILACDTYS QPIVARKSSH TVNKASVQAR INNITAALAE RSAPYIERAH
HQAEVLGLPF LPTTTIGSFP QTGEIRTERS AYRQGKLSEQ EYVQALKGHI ADAVKRQEAL
GLDVLVHGEA ERNDMVEYFA ENLAGFQTTQ FGWVQSYGSR CVKPAIVVAD IEREKPITVE
WSTYAQSLTS KQMKGMLTGP VTILCWTFPR EDISRQEIAQ QLALALRDEV ADLQDAGINI
IQIDEPAIRE GLPLKKRDHQ TYLDWAVQAF KISAGSARPE TQIHTHMCYS EFNEIIESVA
ALDADVITIE TSRSNMELLK AFEEFNYPNE IGPGVYDIHS PNIPAQTWIE DLLRKAAEKI
PAQRLWVNPD CGLKTRNWPE VEAALTNMVN AAKALRAEWQ A
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