| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1297 |
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| Symbol | torC |
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| ID | 5136432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1380325 |
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| End bp | 1381509 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532755 |
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| Product | cytochrome c-type protein TorC |
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| Protein accession | YP_001217241 |
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| Protein GI | 147674416 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGT TAATTTTAAA AATGTGGCGC ACCATGACGC GTCCCGCGGT ACACATTAGC
CTAGGGGTAT TGACTCTCGG TGGCTTTATC GCTGGGGTAA TTTTCTGGGG CGGCTTTAAC
ACCGCTTTGG AAGCGACCAA CACGGAAGAG TTCTGTATCA GCTGTCACAC CATGCGTGAC
AACGTGTACC AAGAGCTGCA AACCACAGTG CACTGGAAAA ACCACTCTGG TGTGCGAGCG
ACCTGTCCTG ATTGTCACGT CCCGCATGAG TGGACAGCGA AAATCGCACG TAAGATGCAA
GCTTCAAAAG AAGTATTCGC ACAGATCTTT GGTGATTTAG ATACACCAGA AAAGTTTGAA
GAGCGCCGAA TTGAATTGGC AAAACACGAA TGGGATCGCT TTGCGGCGAA CAAATCTCTG
GAGTGTAAAA ACTGCCATAA CTACGAATCG ATGGATTTTG ATCAGATGTC CGCAACGGCG
CGCATCCAAA TGAAGCAAGC GGCTGAGCGC GATCAAAGCT GTATCGATTG CCACAAGGGG
ATTGCCCACA ACTTGCCGAA AAACATGGAG AGCTCAAGCG GCTTGATTGG TGAGCTCGAA
GGTATGGCAT CCAACACCAA ATACTCCAAT GGTGAAACCT TAGTCAGCGT GCGTTTCCTC
CCTGTGTATG AAGATGATCA AGCCAAAGTG GAAGCGGGTC TACTCAACCC TGCTTCTGAA
GTGAAAGTGC TGACTGAAAA AGGCGACATG ATGCAAGTGG AGATCAACGG CTGGCGTAAA
TCGAAAGGCT TTGGCCGTGT GATCCAAGAA GATTTCGGTA TGAACATCGC GGTGGCGTCG
CTACTGAAAG AGGCCGCCAT GTCGGATGCG ATTGTGACCA CGGGTGAGCA GAAAGTCGAT
GATATGACGG GTCTACCTTG GGAACAAGTG AGCGCGAGAG TGTGGATGAA AAAAGAAGCC
ATGCTGAACG ACATCAACCC GGTTTGGGAA AAAGCGCGTG AAGCATACAA GACCAACTGT
TCTGTCTGCC ACACCCAACC GGATGAAGCG CACTTTGATG CCAACACTTG GCCTGGCATG
TTCGACGGTA TGTTGGCATT CGTCAACTTC GATACCGACA GTGAAGCGCT GGTACTCAAG
TATCTGCAAA AACACTCTTC AGATTTCGCT GAAGGCCATC ACTAA
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| Protein sequence | MKSLILKMWR TMTRPAVHIS LGVLTLGGFI AGVIFWGGFN TALEATNTEE FCISCHTMRD
NVYQELQTTV HWKNHSGVRA TCPDCHVPHE WTAKIARKMQ ASKEVFAQIF GDLDTPEKFE
ERRIELAKHE WDRFAANKSL ECKNCHNYES MDFDQMSATA RIQMKQAAER DQSCIDCHKG
IAHNLPKNME SSSGLIGELE GMASNTKYSN GETLVSVRFL PVYEDDQAKV EAGLLNPASE
VKVLTEKGDM MQVEINGWRK SKGFGRVIQE DFGMNIAVAS LLKEAAMSDA IVTTGEQKVD
DMTGLPWEQV SARVWMKKEA MLNDINPVWE KAREAYKTNC SVCHTQPDEA HFDANTWPGM
FDGMLAFVNF DTDSEALVLK YLQKHSSDFA EGHH
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