Gene VC0395_A1294 details

Gene Information

• Locus tag: VC0395_A1294
• ID: 5136805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1375169
• End bp: 1375900
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640532752
• Product: hypothetical protein
• Protein accession: YP_001217238
• Protein GI: 147673958

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTTT TTGGGCGTGA AATGTGCTTG TTTGGAAGGC TTTTTTCTAT CCTTGTACTT 
AGCTTAATCG GCATCTCACA AGTTAAAGCC TATGAGATCG CCTTAGGTGA GACTTACGTA 
AATGAACTTT TCTCAGAACA GAATCAATTA GTCAAATTAA CGGATGATCT TACCTCGATA 
TACCAACAAA TCGGTATATC ACCCACCTTC GTCGTACTAC CCGATGAGCG AGCCGTCAGG 
ATGAGTAATG AGGGACATTT TCAAGCGTTG GATTTACGAA TTGGCGCTCT GCCTAATGCC 
AGCAATCTTA TCAAAGTCGA GCCCGCGCTT TATTCAATGA CTGTTGTCGC TATTTCCGCC 
AATCAAACCT TATTCTTCGA CGATCTTAAT GCATTAAAAG ATCTCAAAAT TGTCATTCTT 
AATGGTACGC AATATGCCAA AGAGCTGAAT TTAGGCAGCC AAGTTTATCA GGTCAACTCT 
GCTCAATCTG CCGCCGAAAT GGTCAGCAAA TCACGCGTCG ATATATGGCT CACGGCCGTT 
CCAGTTTTCT TCCAGGTAAA AAATCAATAC CCTAAACTTA AAGTGGTGAG TAACCCTCTC 
TTACAAGAGG AGCTTTATCA TTACGTTCAC CAAACTCAAA AAGACCTCTT GCCACAATTG 
AGTCAGAGTA TTGAAAAATG GCAACAATCC CAAAACCTCT CCATCGAGCC AAACAATAAT 
CTGGTCAAAT AA 

 

Protein sequence

MFFFGREMCL FGRLFSILVL SLIGISQVKA YEIALGETYV NELFSEQNQL VKLTDDLTSI 
YQQIGISPTF VVLPDERAVR MSNEGHFQAL DLRIGALPNA SNLIKVEPAL YSMTVVAISA 
NQTLFFDDLN ALKDLKIVIL NGTQYAKELN LGSQVYQVNS AQSAAEMVSK SRVDIWLTAV 
PVFFQVKNQY PKLKVVSNPL LQEELYHYVH QTQKDLLPQL SQSIEKWQQS QNLSIEPNNN 
LVK