| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1273 |
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| Symbol | |
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| ID | 5137236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1352046 |
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| End bp | 1352753 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532731 |
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| Product | pseudouridine synthase Rlu family protein |
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| Protein accession | YP_001217217 |
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| Protein GI | 147675726 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA TTCTGTTTAC CCATCCTGAT TTTCTGCTTA TCAATAAACA CCCCAACGTA
TCGGTCCATA AAGATGATGG CGATACTATG TTGCTGCAAG AAGTGGCGAC GCAAACAGGG
GATGCCCAGC TCTATTTGGT GCATCGGTTG GATAAGATGA CGTCAGGGAT TTTGTTGTTG
GCAAGAAATG CCACCTCGGC CAGTGAACTT TCGCAAGGCT TTGCTAAGCG CAAGGTTGAA
AAATTCTATC TGGCGATTGG CAGTAAAAAG CCGAAGAAAA AACAAGGTTT GATTTGCGGA
GATATGGAGC GCTCACGTCG CTCATCATGG AAGCTGGTGA ACTCGCAAGA AAATCCGGCG
ATCACGCAAT TTTTCTCTGC GACCGCGGCA CCGGGGGAGC GCTTGTTTTT GTGTAAGCCC
CATACCGGAA AAACCCACCA AATTCGCGTA GCGTTAAAAT CGATTGGTTC TGCGATTGTA
GGGGATCCTA TTTACAATAC GGCGGATAAG TCCGATCGCG GTTATCTGCA CGCTTTTGCC
TTGCGTTTTA CCTATCAAGG AGAGGTTTAC CAATGGCAGT GCGATCCGCG TCAGTTTTCA
CACTTAGGTC AGAAATGGCA CGAAGAAGCG GTGAGCCAAG GGATTGAAAA TTGGCTATCA
CCTTGGGATT TACCTTGGCC AGCGCTGAAA GTGGGGGTGA AAGAGTAG
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| Protein sequence | MFDILFTHPD FLLINKHPNV SVHKDDGDTM LLQEVATQTG DAQLYLVHRL DKMTSGILLL
ARNATSASEL SQGFAKRKVE KFYLAIGSKK PKKKQGLICG DMERSRRSSW KLVNSQENPA
ITQFFSATAA PGERLFLCKP HTGKTHQIRV ALKSIGSAIV GDPIYNTADK SDRGYLHAFA
LRFTYQGEVY QWQCDPRQFS HLGQKWHEEA VSQGIENWLS PWDLPWPALK VGVKE
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