| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1244 |
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| Symbol | |
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| ID | 5136755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1316742 |
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| End bp | 1317401 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532702 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_001217188 |
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| Protein GI | 147675175 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000551267 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT TAGTTGTTGA AGATGATGTT CAGTTAGGCC AGCAGATCCT CTCGGCGTTA
GAGCAAACAG GTTGGGTTCC CGAACTGGCA CAAGATGGCA TCGATGCCTT ATACCGCGCC
ACCGCGGAAG AGTGGGACGT CATCGTACTC GATCTCGGTC TACCGAAATT GGATGGTTTG
ACCGTCCTTA AAGGCATTCG AGACGAAAAC ATCAACACTC CTGTGGTGAT TTTGAGTGCA
CGCGACACCC TCACTCAACG GGTCGAAGGT TTGAATGCAG GAGCGGACGA TTACCTCACC
AAACCCTTTG AAATGGTTGA GTTGATTGCT CGTATTCGCG CCCAACTGCG CCGTGCGTCC
GGCAATGCCT CCCCAGTGAT GCAAGTCGGT GACCTGAGTT TAGATACGCG CACTTCCAAA
GTAATGTGGC AAGGGCAAGC GGTTAGCCTC ACCGCCCTCG AATATAAAGT GATCGCCTAT
TTCATGCATA ACCCTGAGAA AGTGATTTCA CGCACTGAGC TTGTCGAACA TATCTATAAG
CAAGATTTTG ACCGCGATTC CAATACCATT GAGGTGTTCA TCGGACGCAT TCGTAAGAAA
ATTGCGCCGG ATGTGATCAA AACTGTGCGC GGTCTTGGGT ATCAGTTGCA TGCCAATTAA
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| Protein sequence | MKILVVEDDV QLGQQILSAL EQTGWVPELA QDGIDALYRA TAEEWDVIVL DLGLPKLDGL
TVLKGIRDEN INTPVVILSA RDTLTQRVEG LNAGADDYLT KPFEMVELIA RIRAQLRRAS
GNASPVMQVG DLSLDTRTSK VMWQGQAVSL TALEYKVIAY FMHNPEKVIS RTELVEHIYK
QDFDRDSNTI EVFIGRIRKK IAPDVIKTVR GLGYQLHAN
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