Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1229 |
Symbol | |
ID | 5137757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1295527 |
End bp | 1296165 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532687 |
Product | putative outer membrane protein |
Protein accession | YP_001217173 |
Protein GI | 147673877 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000815007 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATCA AATCATGGGC TCTGCCACTA TTTCTTTGCA CTGTAACCAC GTCGGCATTG GCAAATCAAG GTCAATATAC AAAGCACGAA GGTGATGAGT ACGACTATCG TCCAACTCCA CTCGCGAATC AGATTGCGGA TCTGCAAGAT GACGATAGAG ACGGTGTTAT CAATGCTCGC GATCTTTGCC CTGATACACC TAAGGGCTCT GAAATCGATA ATGATGGCTG TGGCACCTTT GTCAAATCAT CACAGATGCA GCAATTACAT ATTCTGTTTG CTAATGACTC GAGCTCGATT GAGCCTGCGT TTTTAACGCA AATCCGTCAA ATGGCTGAGT TTTTGCAAAC CTATCCTTCA ACATCTATTG AGTTACAAGG CTACGCGAGC AAAGTAGGCA GCGCGGAACA TAACCTTGCC CTCTCTAAGC AGCGTTCAGA AGCGGTTCGT GACCAATTAC TGCGTTATGG CGTAGCGCCA GAGCGCGTGA ACATTGTCGG ATACGGGGAT AGCGTTTTGG AAGTAGAAGG TACCGATGAT GTGAGCCACG CTCGTAACCG TCGTGTTACT GCAACAGTTG TTGGCTACAA AGGTGAAGTG GTCAAAGAGT GGACGATTTT TACGACACTT CCTATGTAA
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Protein sequence | MSIKSWALPL FLCTVTTSAL ANQGQYTKHE GDEYDYRPTP LANQIADLQD DDRDGVINAR DLCPDTPKGS EIDNDGCGTF VKSSQMQQLH ILFANDSSSI EPAFLTQIRQ MAEFLQTYPS TSIELQGYAS KVGSAEHNLA LSKQRSEAVR DQLLRYGVAP ERVNIVGYGD SVLEVEGTDD VSHARNRRVT ATVVGYKGEV VKEWTIFTTL PM
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