| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1200 |
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| Symbol | |
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| ID | 5136103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1264951 |
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| End bp | 1265775 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532658 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217146 |
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| Protein GI | 147675228 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.285337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAGTGA GGAGTCAACT TACCCATTAT TCAAAGACTA GCCTAGACCA CCAAGGAACC
GTCATGCTGA GCAACGGATA CTTAAAACGT TATGTGCGCT GCTGCTTGCT CATCATAGGA
TTATGTCCCG CGCTGCTGTA TGCACAATCC TCCCCCAACG CAGAGGATAA ACTCGTGCGT
ATTGCATCCG GCGAATGGCC ACCTTTTATC GGCAGTGATT TACCTAACTA TGGTTTTGTT
GGTGAAATCA TCACCCAAGC TTTTACCAAG CAAGGTTATC AAGTGGAATT CCAGTTTTTA
CCATGGGCAA GAGCTTATGC TGAAACCCAA CGCGGTTTGT ACGATGCCAC TGCGATCTGG
ATGCACAGCG CGGAGCGTGA AATCGATTTT TTCTATAGCT TGCCAGTGAG CCAAGAAGAG
TTTGTTTTCT TTTATCCCGT TAAAAAGCCA TTTGATTGGA AAACCTTAAG CGATTTAGCC
CCTTATAAGT TAGGCGGCGT ACTGGCCTAC AGCTATGGTA AAGAGTTGGA TGCCCTACTC
GACTCTGGCG TACTGACGAT GGAACGCGAT GGCTTAGCGG CAAAAAATCT CGAAAAACTC
GCTAAAGGCC GAGTCGATCT GGTACCAGAG GAAAAACATA TTGGCTACTA CCTCATCAAC
CAACAAATTC CACATTTGCA AGATTTGATC ACCCACCACC CCACACCTTT TCTCACTAAC
AGTAATTATC TGCTGTTTCC CAAGCAAAGT GCGCGCAGCC AAGAGTTATT AGGCGTGTTT
AATCATTACC TCGTTCAAAC GCAAAAGAAG AAGAAAAAAC AGTAG
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| Protein sequence | MTVRSQLTHY SKTSLDHQGT VMLSNGYLKR YVRCCLLIIG LCPALLYAQS SPNAEDKLVR
IASGEWPPFI GSDLPNYGFV GEIITQAFTK QGYQVEFQFL PWARAYAETQ RGLYDATAIW
MHSAEREIDF FYSLPVSQEE FVFFYPVKKP FDWKTLSDLA PYKLGGVLAY SYGKELDALL
DSGVLTMERD GLAAKNLEKL AKGRVDLVPE EKHIGYYLIN QQIPHLQDLI THHPTPFLTN
SNYLLFPKQS ARSQELLGVF NHYLVQTQKK KKKQ
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