| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1193 |
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| Symbol | |
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| ID | 5137605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1256334 |
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| End bp | 1257092 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640532651 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | YP_001217139 |
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| Protein GI | 147673245 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGTT TAACCCATAA AGTCGCCTTA GTGACAGGTG CCGCTAACGG TATTGGACTG
GCGATTGCCG AACGTTTATA TCAAGAAGGC GCAACCTTAG CGCTGGCTGA TTGGAATGAA
GAGCAGTTAG CCATTGTGAT TGAGCAGTTT GATTCTGCGC GAGTTTACGC GCAAAAAGTC
GATGTCTCGG ATCCCGAACA GGTGCAAGCT TTAGTACGTA AAACGGTCGA GCGTTTCGGG
CGTCTAGATA TTCTCGTCAA CAACGCAGGG ATTCATATTC CGGGCACAGT GTTGGAGTGC
AGCGTGCAAG ATTGGCGACG CATCGCCTCG GTTAATATAG ATGGAGTGGT CTACTGCGCA
ATGCATGCAT TACCTGAGCT AATAAAAACG CGCGGCTGCA TGGTGAATAC GGCGTCCGTG
TCCGGCTTAG GCGGTGACTG GGGCGCAGCC TTCTACTGCG CGACTAAAGG TGCGGTAGTC
AATTTCACTC GCGCTCTAGC ACTGGATCAC GGTGCGCAAG GTGTACGCAT TAACGCGGTA
TGTCCAAGTT TGGTGAAAAC CAATATGACC AACGGCTGGC CACAAGCGAT CCGCGATCAA
TTCAATGAAC GCATCGCTTT AGGCCGAGCC GCAGAACCAA AAGAAATAGC CGCCGTCGTC
GCCTTTTTAG CCAGTGATGA TGCCTCGTTT GTCCATGGGG TGAATCTTCC CGTTGATGGT
GGTGCCACCG CCTCCGACGG GCAACCTAAA ATCGTTTAG
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| Protein sequence | MRGLTHKVAL VTGAANGIGL AIAERLYQEG ATLALADWNE EQLAIVIEQF DSARVYAQKV
DVSDPEQVQA LVRKTVERFG RLDILVNNAG IHIPGTVLEC SVQDWRRIAS VNIDGVVYCA
MHALPELIKT RGCMVNTASV SGLGGDWGAA FYCATKGAVV NFTRALALDH GAQGVRINAV
CPSLVKTNMT NGWPQAIRDQ FNERIALGRA AEPKEIAAVV AFLASDDASF VHGVNLPVDG
GATASDGQPK IV
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