| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1160 |
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| Symbol | |
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| ID | 5136438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1220053 |
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| End bp | 1220766 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532618 |
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| Product | putative glycerophosphoryl diester phosphodiesterase |
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| Protein accession | YP_001217106 |
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| Protein GI | 147674964 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCTT CAATCATCGT CGGCCACCGT GGGGTGGCTG GAACGTATCC AGAAAATACC
CGTGTCAGTG TACAAGCCGC TATCAACCTT GGTTTATCTT GGGTGGAAGT GGATGTGCAG
CCGACCAAAG ACAATGTACT GGTTGTGTGT CACGACCATA CGATTGACCG TTGCAGTAAT
GGCAAAGGTC GCATTGATGA GTACACACTC GCCGAACTCA AGCAACTTGA TTTCGGTGCT
TGGTTTGATC CTCGTTTTGC GGGCGAAACC ATCATGACGC TGGAAGAGCT GCTGGTGCTC
GCCGCCGAAC ACGATTTAGG ACTCAATATT GAAGTCAAAG TCGATAAGCA TGATGTGGCC
AGTGTTGTAC AACAGTTGAA AGCGCAACTT GACCAGAGCC CGCTGGTTGC CGACAAAATC
TTACTGTCGA GCTTTAGCCA CGACATTATT TTGCAACTGC ACCAGCATTG TCCGGGTTAT
AAATTGGGGA TTTTGAGTGA GCGTTTGACT CAGCGGGATC GCCAAGTGCT TAAACAGGTG
AATGCGTTTA GCTGTAACCT CAACTACCGC TGGATCACAG AAAAACACAT CCGCGATTTG
AAAAATGGTG GCTACCAGAT TTGGTGTTAC ACCCTCAATC AAGTGGATAA ATTCCGCTAT
TTAGACAAAG TCGATGCCAT TTTCTCCGAC TTCCCAGAGC GCTTTATCAA CTAG
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| Protein sequence | MMPSIIVGHR GVAGTYPENT RVSVQAAINL GLSWVEVDVQ PTKDNVLVVC HDHTIDRCSN
GKGRIDEYTL AELKQLDFGA WFDPRFAGET IMTLEELLVL AAEHDLGLNI EVKVDKHDVA
SVVQQLKAQL DQSPLVADKI LLSSFSHDII LQLHQHCPGY KLGILSERLT QRDRQVLKQV
NAFSCNLNYR WITEKHIRDL KNGGYQIWCY TLNQVDKFRY LDKVDAIFSD FPERFIN
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