| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1108 |
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| Symbol | |
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| ID | 5135185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1165328 |
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| End bp | 1166587 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532566 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217054 |
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| Protein GI | 147675189 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000845315 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGTTGTC CGCCTATGAC CTCCTCATCC TCTTTATCTC ATCATGCATC GCAGTCGGGT
CAAGTTCGTT TGTGCCCCGG CTGCGAACTG CCTATTGATG CGATTACGGT TGACCAAGCC
CACAGCGCTC ATTGCCCCCG TTGTGGCACG CTACTTTATC GTGGCGGTAG CCCTTCTCTC
TCCGGCGATC TTGCTCTTGC GGTCACTTGT TTGCTGCTGT TTATTCCTTC CCACTTTTTC
AGTTACATCG ATATTCGACT GTTTGGTGTG ATGATCCCAG CCACCTTGCC GCAAGGTGTA
TTCGCTTTGT GGGATGAAGG TTACATCGCC TTGGCGTTAT TGGTGCTGTT TTGTAGCTCG
ATTGCGCCAC TGGTTTTATG TTTGAGTGTA GTCAGTGCTC ATCTCGCCCT GCGTTTTCGC
TATTTTCAGA CCCTGCGTTA CTCATTGCTC TTTATTCATC ATCTCAAAGT CTGGGTCATG
ATCGATGTGT TCCTGGTTAG CGTGGCCGTG TCCTGCTTTA AGCTAAAAGA TTACTCCGAT
ATTTTTATCG GCCCCGGATT ATTAGGGTTG GTGCTTCTGC AACTGTTTAC GGTCTTACTG
CTTAGTCGTA TCAGTACTCG CCGCTATTGG GAAACCTGGC AAGCTGAAAC GGAATATGAT
TTGCCCGTCA AGCAGGTGCA TTGCCATAAC TGCCACCTTT CACAGCCAGA AAATGGTCAC
TGTGTTCGCT GTCAGCACAA GCTTTACCAC AGAAAACCTA ACTCTATAGA ACGAACATGG
GCTTATGTTT TAGCAGCAAC GGTGGCGATT TTTCCTGCTA ACTTGATCCC TATTTCTATT
TTGATCACCA ATGGTCAGCG CTTGGAAGAT ACGATTTTTT CTGGTGTGGC TTCGCTCGTG
AAAAATGGCA TGTGGGGTAT TGCGCTGATC ATCTTTGTCG CCAGTATTGT GGTTCCCGTG
ATCAAAATCA TTGGCCTCGC CTATCTCTTA ATGGCCATCA AACTGAAACG TCACGTGCAT
CAGCGTCAAC GTATGATGAT TTATCGTGGC ATCAAATGGA TTGGCAAATG GTCGGTGATG
GATCTGTTTG TCATCTCTAT CATGCTGACA TTGGTTGACC GAGGTCAGAT CCTCGATTTT
ACTCCCGGTT ACGGGGCTGT CGCTTTTGGT ATGGTCGTGG TGCTCACCAT GTTAGCCGCG
GAAAGTTTAG ATCCGCGCTT ACTGTGGGAT GAGCCCGACT CCACTCGTAC TCAACAATAG
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| Protein sequence | MCCPPMTSSS SLSHHASQSG QVRLCPGCEL PIDAITVDQA HSAHCPRCGT LLYRGGSPSL
SGDLALAVTC LLLFIPSHFF SYIDIRLFGV MIPATLPQGV FALWDEGYIA LALLVLFCSS
IAPLVLCLSV VSAHLALRFR YFQTLRYSLL FIHHLKVWVM IDVFLVSVAV SCFKLKDYSD
IFIGPGLLGL VLLQLFTVLL LSRISTRRYW ETWQAETEYD LPVKQVHCHN CHLSQPENGH
CVRCQHKLYH RKPNSIERTW AYVLAATVAI FPANLIPISI LITNGQRLED TIFSGVASLV
KNGMWGIALI IFVASIVVPV IKIIGLAYLL MAIKLKRHVH QRQRMMIYRG IKWIGKWSVM
DLFVISIMLT LVDRGQILDF TPGYGAVAFG MVVVLTMLAA ESLDPRLLWD EPDSTRTQQ
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