Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1091 |
Symbol | fabA |
ID | 5135159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1142111 |
End bp | 1142629 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640532549 |
Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
Protein accession | YP_001217037 |
Protein GI | 147674296 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.671616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAACA AACGTGATTC GTATAATCGA GAAGATCTTT TAGCGTCAAG CCAAGGTGAG TTGTTTGGTG AGGGCTATCC TCAACTTCCA GCGCCAAATA TGTTGATGAT GGATCGCATT ACCAAGATGT CAGAAACTGA AGGTGAATTT GGTAAAGGTT TGATCTTAGC TGAGCTCGAT ATCACGCCTG ATTTATGGTT TTTTGATTGC CATTTCCCAG GAGACCCAGT GATGCCGGGA TGCTTGGGCT TAGATGCCAT GTGGCAACTG GTGGGTTTTT TCCTTGGCTG GGTTGGCGGT AAAGGTAAAG GTCGCGCGCT TGGCGTTGGC GAAGTGAAAT TTACAGGACA AATTTTACCA ACAGCTAAAA AAGTCACCTA CGAAATTAAC ATGAAGCGTG TGGTGAACCG TAAGCTAGTG ATGGGTTTAG CCGATGGTCG CGTACTTGTT GATGGCAAAG AAATATACGT AGCCAAAGAT CTTAAAGTTG GCTTGTTCCA AGATACGTCT GCGTTTTAA
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Protein sequence | MQNKRDSYNR EDLLASSQGE LFGEGYPQLP APNMLMMDRI TKMSETEGEF GKGLILAELD ITPDLWFFDC HFPGDPVMPG CLGLDAMWQL VGFFLGWVGG KGKGRALGVG EVKFTGQILP TAKKVTYEIN MKRVVNRKLV MGLADGRVLV DGKEIYVAKD LKVGLFQDTS AF
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