Gene VC0395_A1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1088 
Symbol 
ID5137638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1139447 
End bp1139779 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content44% 
IMG OID640532546 
Producthypothetical protein 
Protein accessionYP_001217034 
Protein GI147673500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTTA TGAATATGCT TTATGTAATA CTTGTCGCGG CGATAATTAT CTTCTGGCTA 
GTCGCGATCG ATAGACCCAT CTTGGTGGTC AGCTTCAAAG ATGGTCATCT TGTTCGTAGC
AAGGGACATT TTCCGCCAAC ATTCAAACAT AACCTTATCG ATATCGCTCA ACATGAACCT
TTTTCAGGGG AAATTAAGGT GTATCAACAA AGGACTGGAG CCAAGCTGGC GTTTTCGAAG
CAAGTCCCGA AAAAGATCCA GCAAAGAATC CGCAACGTAT TCCCACACCA AGGCTTTACA
CGCCAAAGCT CGACATTAAA GAAAGGTCGC TAA
 
Protein sequence
MSLMNMLYVI LVAAIIIFWL VAIDRPILVV SFKDGHLVRS KGHFPPTFKH NLIDIAQHEP 
FSGEIKVYQQ RTGAKLAFSK QVPKKIQQRI RNVFPHQGFT RQSSTLKKGR