| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1058 |
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| Symbol | |
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| ID | 5136973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1105160 |
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| End bp | 1106266 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532516 |
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| Product | RtxB protein |
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| Protein accession | YP_001217004 |
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| Protein GI | 147675369 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGTTG AGCCGCGATT TATCCGACGC TGGGATGAAC AAACCGAAAA AATGGTCACA
ACGGGTTATG ACGTCCAGCA GCTTAATAAC CGTTCTAACC ATTTAGTGCA GTTGCTGCAA
AAAATCACCA GCGTCGCCAT TTTATGGTTG GGGGCGACGG AAGTGCTCTC ACTTGAGATG
ACCATTGGTC AACTGATCGC TTTCAACATG ATGACCAACC ACATTGCGCA GCCCTTAGCG
CGGATGGTCG AGCTGTGGGG ACAATTTATT CAAACTCGGG TCGCCATCGA GAAGCTCGGC
GATATGCTTA ACCTACCAGT AGAACAACAC ACAGGGAGTG ACAATGTCAC TATAAGCGGC
GCTATTAGTT TCAAAAACAT CCTCTTTCGT TATCAACCGG ATATTCCTCC TACCATTAAT
GATTTGTCGC TAGACATCCG TGCAGGTGAA ACATTGGGGG TGGTCGGCAC CTCGGGCTCA
GGCAAAAGCA CCCTCGCCCG TCTGTTGTTG CGACTTTATA GCCCTGAGCA AGGCAGTATT
ACCATTGACG GCATTCCACT CAATCACATC AATGTTCAAC AGCTCAGACA GCGAGTGGGT
GTGGTATTGC AAGAGAACTT TTTATTTCAC AAAAGCGTGA GTGAAAATAT TGCCCAATCT
AAGCCTGAGG CAAGTTTGGA AGAGATCATT GAGGCTGCAA AACTCTCGGG CGCACATGAC
TTCATCCTCA AACTTCCCAT GGGTTACGAC ACGGTATTAG CAGAAGGTGG TCAATCGCTT
TCAGGTGGTC AACGGCAGCG TCTCGCGATT GCACGCACCC TTTTATCAGA TCCGAAAGTG
CTGATTTTGG ATGAAGCAAC CAGTGCGCTG GATGACGAAT CTCAAGCCGT CATTCAAGCC
AATATGGCCA GCATTGCCAG AGGCCGTACG GTGATCACGA TTGCTCATCG CTTGTCTACG
GTGCGTGATT GCGATCGCAT CATAGTGCTT CATCAGGGCA CGATTGTTGA GCAAGGCTCA
CACCAACAAT TACTCGCCTA CGGCAAACAA TACAAACAGT TATGGCAGCT TCAGCAAGAG
CTCAAACAAG AGGAAGCCTC CGCATGA
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| Protein sequence | MAVEPRFIRR WDEQTEKMVT TGYDVQQLNN RSNHLVQLLQ KITSVAILWL GATEVLSLEM
TIGQLIAFNM MTNHIAQPLA RMVELWGQFI QTRVAIEKLG DMLNLPVEQH TGSDNVTISG
AISFKNILFR YQPDIPPTIN DLSLDIRAGE TLGVVGTSGS GKSTLARLLL RLYSPEQGSI
TIDGIPLNHI NVQQLRQRVG VVLQENFLFH KSVSENIAQS KPEASLEEII EAAKLSGAHD
FILKLPMGYD TVLAEGGQSL SGGQRQRLAI ARTLLSDPKV LILDEATSAL DDESQAVIQA
NMASIARGRT VITIAHRLST VRDCDRIIVL HQGTIVEQGS HQQLLAYGKQ YKQLWQLQQE
LKQEEASA
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