Gene VC0395_A1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1052 
SymbolccoO 
ID5137420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1095909 
End bp1096529 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content45% 
IMG OID640532510 
Productcbb3-type cytochrome c oxidase subunit II 
Protein accessionYP_001216998 
Protein GI147673108 
COG category[C] Energy production and conversion 
COG ID[COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit 
TIGRFAM ID[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.281252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCTA ATTCTAATAA TCGCCATGAA CTACTTGAGC GTAATGTCGG CTTACTGGCT 
ATTTTCATTG TTTTTGCCAT CAGTTGGGGT GCTCTGGTTG AGATTACCCC ATTGATTTTC
CAAAAACAGA CCACGGAAGA AGTACAGAAC CTCAAACCTT ATACCGCGTT GCAACTCGAA
GGTCGCGACA TTTACATCCG TGAAGGTTGT AACGTTTGTC ACAGCCAGAT GGTGCGCCCA
TTCCGTTCTG AAACCGAGCG TTATGGCCAT TACTCTGTGG CAGGTGAAAG TGTTTGGGAA
CACCCATTTT TATGGGGCTC TAAACGTACT GGTCCTGACT TAGCACGTGT GGGTGGTCGT
TATTCTGATG AATGGCACCG TGTTCACCTA TTGAACCCAC GTGAACTGGT TCCTGAATCA
AATATGCCTG CATTCCCATG GCTGGCAAAA AACACTCTGG ACGGTAAATA CACGCAACAA
AAGATGACCT TGTTCCGTGA CAAGTTTGGT GTTCCGTACA CAGATGAACA AATCGCAAAT
GCGACAAAAG ATGTAGAAGG TAAAACAGAG ATGGATGCCA TCATTGCTTA TCTTCAATCT
CTTGGTCATG CAATGAAATA G
 
Protein sequence
MSSNSNNRHE LLERNVGLLA IFIVFAISWG ALVEITPLIF QKQTTEEVQN LKPYTALQLE 
GRDIYIREGC NVCHSQMVRP FRSETERYGH YSVAGESVWE HPFLWGSKRT GPDLARVGGR
YSDEWHRVHL LNPRELVPES NMPAFPWLAK NTLDGKYTQQ KMTLFRDKFG VPYTDEQIAN
ATKDVEGKTE MDAIIAYLQS LGHAMK