| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1050 |
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| Symbol | ccoP |
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| ID | 5137766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1094745 |
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| End bp | 1095725 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532508 |
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| Product | cytochrome c oxidase, subunit CcoP |
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| Protein accession | YP_001216996 |
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| Protein GI | 147675355 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.26248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAT TCTGGAGTCT TTGGATCATC GTGATTACTG TGGGTACTTT GCTCGGTTGC
GCTATTCTGC TCGTTTGGTG TCTGAAAGAC AAAATGGGTG TTGAAGAAGG CGTTGACATG
GGCCATGAGT ACGATGGCAT TCGCGAGTTG AACAACCCGT TGCCAAAATG GTGGACCTAT
CTATTTATTG GTACTTTCAT TTTTGCAGCC ATTTATTTAA CCCTTTACCC AGGTTTAGGC
AGCTTTAAAG GCATTCTCGG CTGGCAAAGT TCAGACCAGA CCGTACGTTC TCTTGAAGAA
TCACGTGCTT CGATTGCTGC CGCACAGCAA AACAAACAAC TGGTTCAGTA TTCAAAAGAA
CTGGACGACG CTGAAGCTTA CTACGGTGAA GCTTTCAAAC GTTTGGCTTA TCAAGACGGC
ACCACTAACT TACGCGAAAT CCAAGATATC GCTGCCGATA GTGATGCTTT AAAAGTAGGT
CAACGCCTGT TTTTACAGAA CTGCTCTCAA TGTCACGGCT CAGATGCTCG CGGCCAAAAA
GGCTTTCCTA ACTTGACTGA TGATGCATGG CTGTATGGTG GTGAACCACA AGCGATTGTG
ACCACCATTC GCCATGGCCG TATTGGCCAA ATGCCAGCAT GGAAAGACAT TTTAGGCGAG
CAAGGTGTGA AGGAAGTCGT TAGTTACACC TTAAGCCTGT CGGGTCGTTC TGTGAATGCT
AAAGAAGCAG AAGCAGGTAA AGCTCGTTTC GCCGTTTGTT CTGCATGTCA TGGTACTGAC
GGTAAAGGTA ACCCAGCCTT TGGTGCACCA AACCTAACAG ATAATGATTG GTTATTTGGT
GATTCTCGTG CTGATGTAAC CGAGACGGTT ATGAACGGTC GCTCAGGTGT TATGCCTGCG
TGGATCAATA CTTTAGGTGA AGAAAAGATT CAATTGGTTG CCGCTTATGT ATGGAGCTTA
AGCAACTCAG AGAATAAGTA A
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| Protein sequence | MTTFWSLWII VITVGTLLGC AILLVWCLKD KMGVEEGVDM GHEYDGIREL NNPLPKWWTY
LFIGTFIFAA IYLTLYPGLG SFKGILGWQS SDQTVRSLEE SRASIAAAQQ NKQLVQYSKE
LDDAEAYYGE AFKRLAYQDG TTNLREIQDI AADSDALKVG QRLFLQNCSQ CHGSDARGQK
GFPNLTDDAW LYGGEPQAIV TTIRHGRIGQ MPAWKDILGE QGVKEVVSYT LSLSGRSVNA
KEAEAGKARF AVCSACHGTD GKGNPAFGAP NLTDNDWLFG DSRADVTETV MNGRSGVMPA
WINTLGEEKI QLVAAYVWSL SNSENK
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