Gene VC0395_A1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1046 
Symbol 
ID5136332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1090974 
End bp1091648 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content49% 
IMG OID640532504 
Producthypothetical protein 
Protein accessionYP_001216992 
Protein GI147673967 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.165842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCCTG ATTATTTGGG GGCTTGGGTG GTAGGCCTGC TGGGAGCGGG TCACTGTTTG 
GGCATGTGCG GCGGCATTAG CGCTTTGCTC ACCCTTGATC CGTCTAAAAG CTCACCAGCA 
CTGCTACTTT ATTACAATCT AGGTCGCCTG CTGAGCTACG CCTTAATTGG CGGTATTGTC 
GGTGGCATCA CCGCTTCACT GACAGAGCTC ATTGATGTTC AATCCGCCTT AGTGTGGCTT 
CGAATTTTCG CAGCTGTGTT GATGATTGTA TTAGGCCTTT ACATCGGACG CTGGTGGTTT 
GGACTACTGT GGCTTGAAAA AGTCGGCCTG AAAATCTGGC CATGGATTTC ACCGCTAGGC 
AAAACTCTTT TGCCGCTAAA AAAACAGTGG CATGCACTAC CCTTCGGCCT TGTGTGGGGC 
TGGCTTCCTT GTGGTTTAGT CTACTCTATG TTGACTTGGT CTGCCGTGGC AGGCAGTTTC 
TCACAAGGGG CACTTATTAT GTTGTCATTT GGGTTTGGCA CCCTACCCGC CATGCTAGCC 
AGTGGCTGGG GAGCTAATAA ATTAATGCAT TGGCAAAATT CGCATTTATT TCGTCAATGT 
GCGGCAATAC TGGTGATTGG GTATGGGCTA TTCACTGCCT ACGATGCCGT AAAGCTGATG 
ATTAATCTGG GTTAA
 
Protein sequence
MSPDYLGAWV VGLLGAGHCL GMCGGISALL TLDPSKSSPA LLLYYNLGRL LSYALIGGIV 
GGITASLTEL IDVQSALVWL RIFAAVLMIV LGLYIGRWWF GLLWLEKVGL KIWPWISPLG 
KTLLPLKKQW HALPFGLVWG WLPCGLVYSM LTWSAVAGSF SQGALIMLSF GFGTLPAMLA 
SGWGANKLMH WQNSHLFRQC AAILVIGYGL FTAYDAVKLM INLG