| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1044 |
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| Symbol | |
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| ID | 5136273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1089055 |
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| End bp | 1090002 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532502 |
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| Product | universal stress protein UspE |
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| Protein accession | YP_001216990 |
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| Protein GI | 147675194 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.106711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTT ACAGTAAAAT TCTTGTCGTG GCTGATATCA ACCATGATGA ACAACCTGCT
TTGGCTCGGG CAATGCAACT GGCGCAAAAA AGCACCTCCG TCAGCCATAT CACTTTCTTC
CTATCGATTT ACGATTTTTC TTATGACATG ACCTCCATGC TTTCTCTCGA AGAGCGTGAT
GCCATGCGCA AGGGGGTGAT CCATCAACGA GAACAGTGGA TGCGTTCCAT TGCAGAGCCT
TATCTAGATA AATCCGTTCA GTTTGACATT AAGGTGGTGT GGCACAACCG TCCTTACGAA
GCGATTATTG GTGAAATTTT TGCGGGTGAA CACGATATCC TGATCAAAGC GACTCGCAAA
CACGACATGC TAGAGTCCGT TATTTTCACT CCAACCGATT GGCACTTGAT GCGTAAGTGT
CCGACACCGG TCTTGTTAGT CAAAAATGCT GACTGGCCAG AAAATGCCAA TATCATTGCC
TCTGTGCATG TTGGCTCTGA GCTAGATACC CATATTGATT TAAATGATCG TATGGTCGAA
CAGCTCCTTA ATTTGAGCAA ACGCTTAGGA GCGAGTCCTT ATCTTGTCAA CGCTTATCCA
GTCACTCCAG CCAACATCAC TATTGAGCTG CCGGAGTTTG ATCCAACCAC CTATACCGAT
GCGGTTCGAG GACATCACCT TACGGCGATG AAGGCTCTTC GCCAAAAACA TGGTTTAAGT
GAAGAGCAAA CGCTTGTCCA ACAAGGATTG CCCGAAGATG TGATCCCAGA AGCGGCCAAA
CAGCTTAATG CAGCTATGGT GATTCTGGGC ACGACAGGTA GAACGGGACT TTCGGCGGTA
TTTATCGGCA ACACTGCAGA ACATGTCATC GATAAAATTA ACTGTGATGT GCTTGCCCTC
AAACCCAATG GCTACGTAAG CCCTCTCGAT CCACAGACAG CCATTTAA
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| Protein sequence | MSIYSKILVV ADINHDEQPA LARAMQLAQK STSVSHITFF LSIYDFSYDM TSMLSLEERD
AMRKGVIHQR EQWMRSIAEP YLDKSVQFDI KVVWHNRPYE AIIGEIFAGE HDILIKATRK
HDMLESVIFT PTDWHLMRKC PTPVLLVKNA DWPENANIIA SVHVGSELDT HIDLNDRMVE
QLLNLSKRLG ASPYLVNAYP VTPANITIEL PEFDPTTYTD AVRGHHLTAM KALRQKHGLS
EEQTLVQQGL PEDVIPEAAK QLNAAMVILG TTGRTGLSAV FIGNTAEHVI DKINCDVLAL
KPNGYVSPLD PQTAI
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