| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0992 |
|---|
| Symbol | |
|---|
| ID | 5137001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 1029499 |
|---|
| End bp | 1030029 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640532450 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001216938 |
|---|
| Protein GI | 147675170 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5018] Inhibitor of the KinA pathway to sporulation, predicted exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTACA ACCGTGTTGT GTGCTTCGAT TTAGAAATGT GTTGTTGGAA CGAAAACGGA
GTGGGAACCA CGGGTGAAAT CATTGAAATT GGTCTAGCAG AAATCGATCT CGCGGCGGGA
GAAATCGTCA AGCGCGCGCA GTACTTTGTC AAACCGGAAA AAGATGAAAT CTCGCTGTTT
TGCGCCGAAC TTACTGGGAT CACACCGCGC AAAATCGAAA AGCAGGGGCG GCCTTTAGCC
GAGGTGATCC AGTCTATGGT CAAAAACTTC GGTGGTTCGA ATAAAATTTA CGCCTCATGG
GGGCGCGATG ACCTCATTTT GCTTAACGAG TGTCGAGAAA AGGGCCTTTC TGTCCCGTTC
CAAGAGTTTC TCAACCTTGC CACCTTGTAT CGTATTCAAC ATCGTTTGAA AGACAAACGT
ATCGGTCATC GCGCGGCTCA GGAATCGCAA GGTATTGAAT GGGAAGGGCG TCAGCACTCA
GGCTATGTTG ATGCCTACAA CTTGGCAAAG TTAGCGTTAA CCATGCTGTA A
|
|---|
| Protein sequence | MNYNRVVCFD LEMCCWNENG VGTTGEIIEI GLAEIDLAAG EIVKRAQYFV KPEKDEISLF
CAELTGITPR KIEKQGRPLA EVIQSMVKNF GGSNKIYASW GRDDLILLNE CREKGLSVPF
QEFLNLATLY RIQHRLKDKR IGHRAAQESQ GIEWEGRQHS GYVDAYNLAK LALTML
|
|---|
| |