Gene VC0395_A0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0971 
Symbol 
ID5136599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1005503 
End bp1006174 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID640532429 
Producthypothetical protein 
Protein accessionYP_001216917 
Protein GI147674004 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000000000502235 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGC CAATGTTTAC CAGAACTTCC AGCTTGGAAC GTACTCTTGA AACCAACAAG 
GTTTTGAAGA ATACCTACTT CCTGCTTTCT ATGACCCTTG TCACCAGTGC GATTGCAGCA 
ATGGCGACTA TGGCTATCGG CATTTCTCCT ATCGTTGCTT TGGTGATGCA GTTGGCTGCC 
ATTGGCATTT TGTTTTTCGT GATGCCAAAA GCGATTAACT CATCATCAGG CCTAGTATGG 
ACGTTCGTCT TTACTGGACT GATGGGAGGA GCTCTTGGCC CTATGCTGAA TTTCTATGCG 
GCGATGCCAA ATGGCCCAAT CGTTATTGCG CAAGCACTCG GCCTGACTGG CATGGTGTTT 
TTAGGCCTGT CGGCTTACAC CATTACCAGC AAGAAAGATT TCTCTTTCAT GCGTAATTTC 
CTGTTTGCTG GCTTGATCAT TGTGATTGTT GCGGCATTGA TTAACATCTT TGTTGGCTCA 
ACGGTAGCTC ATCTGGCTAT CAGTAGCGTT TCTGCACTGG TATTTTCGGG TTTCATTCTG 
TTTGATACCA GCCGTATTGT GCGTGGTGAA GAAACCAACT ATATCTCAGC AACGATTTCT 
ATGTACTTGA ATATCCTGAA CCTGTTCACT AGCTTGTTGA GCATTCTGGG TATCATGAAC 
AATAACGATT AA
 
Protein sequence
MNTPMFTRTS SLERTLETNK VLKNTYFLLS MTLVTSAIAA MATMAIGISP IVALVMQLAA 
IGILFFVMPK AINSSSGLVW TFVFTGLMGG ALGPMLNFYA AMPNGPIVIA QALGLTGMVF 
LGLSAYTITS KKDFSFMRNF LFAGLIIVIV AALINIFVGS TVAHLAISSV SALVFSGFIL 
FDTSRIVRGE ETNYISATIS MYLNILNLFT SLLSILGIMN NND