| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0960 |
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| Symbol | hppD |
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| ID | 5136020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 989932 |
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| End bp | 991041 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532418 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001216906 |
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| Protein GI | 147673060 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTACTT CAACTCAACA CACCAAGGAA ACGATGATGA TGGATAGCGT AAACCCACTC
GGTACAGATG GCTTTGAATT TGTGGAATAT ACTGCCGCTG ATGAGCAGGG CATTGCCAGC
CTCAAACACC TCTTCACCTC TCTGGGCTTT GCCGAAATTG CTAAACACCG TTCTAAAGAA
GCTTGGCTGT ATCGTCAGGG TGACATCAAC TTTATTGTCA ACGCACAGCC TCGTAGCCAA
GCTGAAGCGT TTGCTAAACA GCATGGCCCT TCGGTATGCG GGATGGCGTT TCGCGTGAAA
GACGCGGCGA TTGCTCTCAA GCATGCGCAG GCCAATGGTG CCGTCGAGTA CAAAACTGAG
ATTGGGCCTA TGGAGTTAAG CATTCCGGCG GTGATCGGGA TTGGCGATAG CTTGCTCTAT
TTTGTGGATC GTTATGGCGA TCGCAGCATC TATGATGTCG ATTTTCATTT CTACCCTGAT
AGCAAAGAGC GCCTTGCCAA AGCGCAAGTG GGGTTGTATG AAATTGACCA CCTCACCCAC
AACGTGAAAC GTGGCAACAT GAACCTGTGG GCAGGCTTTT ATGAGCGGAT TGGTAACTTC
CGTGAAATTC GCTACTTTGA TATTGAGGGC AAACTGACAG GGTTGGTGAG CCGAGCCATG
ACCGCGCCCT GTGGCAAAAT CCGTATTCCG ATCAACGAGT CCTCTGACGA TAAATCGCAA
ATCGAAGAGT TTATTCGTGA GTACAAAGGT GAAGGTATCC AGCATATCGC GCTCAGTACC
GAGGATATTT ACCACACTGT GAAAACCTTG CGTGAACGTG GCATGGACTT TATGCCCACT
CCGGACACCT ATTACGACAA GGTGAATCAG CGAGTGGTGG GACATCAAGA AGATGTGCAA
GCACTGCGTG ACTTACGTAT TTTGATTGAT GGTGCACCGA TGAAAGATGG CATTTTGCTG
CAAATCTTCA CTCAAACTGT GATTGGGCCT GTGTTCTTTG AAATCATTCA GCGCAAAGGT
AATCAAGGAT TTGGTGAAGG TAACTTCAAA GCGCTGTTTG AATCGATTGA AGAAGATCAG
ATCCGCCGTG GAGTATTGAC TGATGCATAA
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| Protein sequence | MVTSTQHTKE TMMMDSVNPL GTDGFEFVEY TAADEQGIAS LKHLFTSLGF AEIAKHRSKE
AWLYRQGDIN FIVNAQPRSQ AEAFAKQHGP SVCGMAFRVK DAAIALKHAQ ANGAVEYKTE
IGPMELSIPA VIGIGDSLLY FVDRYGDRSI YDVDFHFYPD SKERLAKAQV GLYEIDHLTH
NVKRGNMNLW AGFYERIGNF REIRYFDIEG KLTGLVSRAM TAPCGKIRIP INESSDDKSQ
IEEFIREYKG EGIQHIALST EDIYHTVKTL RERGMDFMPT PDTYYDKVNQ RVVGHQEDVQ
ALRDLRILID GAPMKDGILL QIFTQTVIGP VFFEIIQRKG NQGFGEGNFK ALFESIEEDQ
IRRGVLTDA
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