| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0922 |
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| Symbol | |
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| ID | 5137794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 943849 |
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| End bp | 945366 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532380 |
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| Product | putative fumarate hydratase, class I |
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| Protein accession | YP_001216868 |
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| Protein GI | 147673955 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.673761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTAA TACGCAAGCA AGATGTGATC AGCAGTGTCG CTGATGCGCT GCAGTACATC
TCCTACTACC ACCCATTAGA CTTTGTAAAA GCCCTAGAAA AAGCCTACCA ACGTGAAGAA
AGCCAAGCGG CGAAAGATTC GATAGCGCAG ATTTTGATTA ACTCGCGCAT GTCTGCAGAA
GGCCACCGCC CCATTTGTCA GGATACGGGT ATTGTCACTT GTTTCGTCAA TATTGGTATG
GGCGTGCAAT GGGATTCGAC CGACATGACG GTGCAGCAGA TGGTGGATGA GGGCGTGCGC
CAAGCGTACA CCAACCCAGA TAACCCACTG CGTGCCTCAG TATTGATGGA TCCTGCGGGC
AAGCGCATCA ATACCAAAGA CAATACCCCA GCTGTGGTGC ACATCAATAT GGTGCCTGGC
GATAAAGTGG ATATTCAAAT TGCGGCCAAA GGCGGCGGCA GTGAAAACAA AACCAAGATG
GTGATGCTCA ATCCGTCCGA TGATATTGCG GAATGGGTAG AAAAAACCGT ACCCTTGATG
GGCGCGGGCT GGTGTCCACC GGGCATGCTC GGCATTGGTA TTGGCGGTAC GGCGGAAAAA
GCGGCCGTCC TCGCCAAAGA AGCTTTGATG GAACACATTG ATATTCATGA GCTTATCGAG
CGTGGTCCGC AAAATGCGGA AGAAGAGCTG CGTTTAGACA TTTTCAACCG TGTGAATAAG
CTCGGTATTG GCGCGCAAGG CCTTGGTGGT TTGACCACAG TGGTTGATGT GAAAATCAAA
TCGGCACCGA CACATGCCGC TTCTAAGCCT GTCTGCATGA TCCCCAACTG TGCGGCGACA
CGCCACGTGC ATTTCACACT CGATGGCAGC GGCCCTGCGC AGTTAACACC GCCTAAGTTA
GAAGATTGGC CACAAATCAC TTGGGAAGCG GGCGCGAATA CGCGTCGTGT CAATCTTGAT
AACATCACCC GTGAAGAGAT CCAAACGTGG AAAACCGGTG AAACGGTTCT GCTGTCTGGC
AAGATACTCA CTGGTCGTGA CGCCGCCCAT AAACGCATTC AAACCATGCT GCAAAAAGGC
GAAAAATTGC CTGACAGTGT CGATTTGAAA GACAAGTTCA TTTACTACGT AGGTCCTGTG
GACGCAGTAG GCGATGAAGT GGTTGGCCCT GCAGGCCCTA CAACTTCAAC TCGTATGGAT
AAGTTTACCG ACATGATGCT GGAAGAGGTC GGCGTCATGG GCATGATTGG TAAAGCTGAG
CGCGGCCCAG CTACCGTTGA ATCGATCAAA AAACACAAAG CTGTTTATTT GATGGCAGTC
GGTGGTGCGG CTTACTTAGT GGCGAAAGCG ATCAAGAAAG CTCGCGTAGT CGCGTTTGAA
GACTTAGGCA TGGAGGCAAT CTACGAATTT GAAGTCGAAG ATATGCCAGT CACTGTTGCT
GTGGATTCAA CGGGCGCGAA TGCGCACCAA ATCGGTCCAG ATACTTGGCG GGTCAAAATC
GCTGAAGCGG CCAAGTAA
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| Protein sequence | MTVIRKQDVI SSVADALQYI SYYHPLDFVK ALEKAYQREE SQAAKDSIAQ ILINSRMSAE
GHRPICQDTG IVTCFVNIGM GVQWDSTDMT VQQMVDEGVR QAYTNPDNPL RASVLMDPAG
KRINTKDNTP AVVHINMVPG DKVDIQIAAK GGGSENKTKM VMLNPSDDIA EWVEKTVPLM
GAGWCPPGML GIGIGGTAEK AAVLAKEALM EHIDIHELIE RGPQNAEEEL RLDIFNRVNK
LGIGAQGLGG LTTVVDVKIK SAPTHAASKP VCMIPNCAAT RHVHFTLDGS GPAQLTPPKL
EDWPQITWEA GANTRRVNLD NITREEIQTW KTGETVLLSG KILTGRDAAH KRIQTMLQKG
EKLPDSVDLK DKFIYYVGPV DAVGDEVVGP AGPTTSTRMD KFTDMMLEEV GVMGMIGKAE
RGPATVESIK KHKAVYLMAV GGAAYLVAKA IKKARVVAFE DLGMEAIYEF EVEDMPVTVA
VDSTGANAHQ IGPDTWRVKI AEAAK
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