| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0887 |
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| Symbol | |
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| ID | 5137728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 901504 |
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| End bp | 903078 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532345 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216833 |
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| Protein GI | 147674156 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00102683 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGAAAA GCCGAGTCGT TGCCGCTATC GCATTGTTAT TCTTTGTTAT TCCGTGTTCT
GCCACCCAGC GTTTTGTTGA ATTGGGGTGG ATTGATAGCA CTTCGCCGGT CAATGAACAG
ATCACCAACC CGGCTTTGGT TGAGCAAATC TATCACAGTA ACAATGATCA GTTACTGTGG
AGCGATCTTG CCACAGCGAA CCATTTTGAA GCTCAGCTTG AGGTGATTCA CCGTGCGAGT
TTCAGCCCTT TATTTAGCCG ACAACTTTTC GCGCTCAAAA GCTATCGTCA GCAAGATAGA
TGGCATGAGT ATGATGTGTT AGCGACCGAC ACTTTACTGC AATACCTCAG CTATGCTGAG
CAGGCACCAA AAGTCGGTAT TGCTTGGTTT TTTGAAGGTC AACTTGATCA ACCTCTTGCT
CTGCCGAGTG AAGAGGCGCA ACTGGCTTTG CATATGGCGA TCGGTAACCA GTCGCTCGCT
CGCTTAATGG ATGAATACAC CCCACAAGAC CCTGCTTATC AACAACTGCT GCAGGCGTAT
CAATCACTCT CGAGCATTGA GTTTAATGAG GTGGCACTAT ACGAGCAGAT GGAGCGGCTT
AAGCGTCCGG GTGACCCATT AAGCCACCGT GAAGCTTTAG TGCAGCGTTT AGCTCTGGTG
AATCTGGATA CCACATCCAT CTTGAATGAT GTGGCCTATT ACGACGCCTC GCTTGAAAAA
CCGATCAAGC AGTTTCAGAA GATGCATGGC TTGCAGCCTG ATGGCGTGAT TGGCCCACAA
ACCATGAAGT GGTTGAACAC ATCCGTAACT GAGCGCCTTG CCTTATTAGC GCTTAATGCA
GAGCGGATTC GCTTATGGCC AACCCAGCAA GACAGCATGA TTGTGGTCAA TGTGCCCGGT
TTTGATATGA AGTATTGGGA TGCCGGCCGC GAAGTCTTTG AAGCCAAGGT TGTGGTAGGC
AAAACCACCA GGCCGACACC GGTGATGAAT ACCAAACTCG ATTCACTGAT CATCAATCCA
ACTTGGAATG TGCCGCATAA AATCATGGTG GAAGACATCC TACCCATGGT GAAACGTGAT
AGTGAGTATC TCGCCAATCA TCATATGGAA ATCATTCGTG GTTGGAGCGA TCCAGAAGTG
ATTGATCCTG CGCTGATTGA TTGGGAAACC GTTGATCCGG CAACCTTCCC ATACCGTCTG
CGCCAACAGG CAGGCGTGCA AAATGCGCTT GGGACCTATA AGTTTAATAC GCCCAATTCA
CGCGCTATCT ATCTGCATGA TACGCCGAGC AAGCATCTGT TTAATAACGC GTCTCGGGCG
TTCAGTTCTG GCTGTATTCG GGTAGAAAAC GCTGAAAAGT TTGCGCAAAC CTTACTCGCT
AATCAGGGCA TTACGCTCGA CGATTTTCCA GTGAGCACCC AAGCGATTGC GCTCAAAAAG
CGCATTCCAG TCCACATCAT CTATCAGACC GTGTGGTATG AAGAAGGTGT GCTACATTAT
CGTGATGATA TTTATCACTA TGATGCTTTA GCTCTCGGCA ATGGTGACGC GTCTCCAAAT
TTGACTAAAA TTTGA
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| Protein sequence | MMKSRVVAAI ALLFFVIPCS ATQRFVELGW IDSTSPVNEQ ITNPALVEQI YHSNNDQLLW
SDLATANHFE AQLEVIHRAS FSPLFSRQLF ALKSYRQQDR WHEYDVLATD TLLQYLSYAE
QAPKVGIAWF FEGQLDQPLA LPSEEAQLAL HMAIGNQSLA RLMDEYTPQD PAYQQLLQAY
QSLSSIEFNE VALYEQMERL KRPGDPLSHR EALVQRLALV NLDTTSILND VAYYDASLEK
PIKQFQKMHG LQPDGVIGPQ TMKWLNTSVT ERLALLALNA ERIRLWPTQQ DSMIVVNVPG
FDMKYWDAGR EVFEAKVVVG KTTRPTPVMN TKLDSLIINP TWNVPHKIMV EDILPMVKRD
SEYLANHHME IIRGWSDPEV IDPALIDWET VDPATFPYRL RQQAGVQNAL GTYKFNTPNS
RAIYLHDTPS KHLFNNASRA FSSGCIRVEN AEKFAQTLLA NQGITLDDFP VSTQAIALKK
RIPVHIIYQT VWYEEGVLHY RDDIYHYDAL ALGNGDASPN LTKI
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