Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0860 |
Symbol | cobS |
ID | 5137798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 871030 |
End bp | 871815 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640532318 |
Product | cobalamin synthase |
Protein accession | YP_001216806 |
Protein GI | 147674142 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCCA TTTTACGTTA TCAACTGGAG CTGTTTTTGC TGGCCGTGAG CTTCTTCTCC CGCATTCCTG TGCCGGTGAG TTTGCCTTAT AGCAGTGAGC GAATGAATCA AGCTGGGCGC TATTTTGCTC TGGTTGGACT CCTGCTCGGG GCGATTTGCG CTTTGGTTTA TTCGCTCGCG ACGCAGCTTT TTTCTACCAA CATCAGCGTG TTTTTGACCA TGGTGTTGAG CTTGTTATTG ACCGGTGCCT TTCATGAAGA CGGCTTAGCG GATATGGCTG ACGGTGTGGG CGGTGGTATG ACGGCTGAGC GACGTCTAGA GATCATGAAA GACAGCCGCA TTGGCACTTA TGGCTCTAGC GCTTTGATTA TGGTTTTGCT GGGTAAATAT TTGCTACTCA CCGAATTGGC CGATCTTACT TCACTGGTTC CTGTTTGGTT ACTGGCTTAT ACCCTAAGCC GCGCGGTGGC GGCGTCTTTG ATTCGTAATA CGCCTTATGT CTCCGATACC GACAGCAGTA AAAGTAAGCC GCTGGCGCAG CAGCTGTCGG GTACGGATGT GGCCGTGTTA TCCCTTACCG CCTTAGCGAC ACTGCTTTAC TTCTCATGGC AGTTTATTGG AGTGATGATC GCCGCCAGCT TGATTTTCAG ACAGATTTTC CGCCAATGGC TTATCAGACG TTTGGGTGGC TTTACTGGCG ATTGCCTTGG CGCCGCACAG CAGTTGATGG AAATTCTGAT CTATCTGATC TTGCTTGCTT TTTTACAGCA TGAAGTGATG ATTTAG
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Protein sequence | MAAILRYQLE LFLLAVSFFS RIPVPVSLPY SSERMNQAGR YFALVGLLLG AICALVYSLA TQLFSTNISV FLTMVLSLLL TGAFHEDGLA DMADGVGGGM TAERRLEIMK DSRIGTYGSS ALIMVLLGKY LLLTELADLT SLVPVWLLAY TLSRAVAASL IRNTPYVSDT DSSKSKPLAQ QLSGTDVAVL SLTALATLLY FSWQFIGVMI AASLIFRQIF RQWLIRRLGG FTGDCLGAAQ QLMEILIYLI LLAFLQHEVM I
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