Gene VC0395_A0847 details

Gene Information

• Locus tag: VC0395_A0847
• ID: 5137706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 859171
• End bp: 859950
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640532305
• Product: hypothetical protein
• Protein accession: YP_001216793
• Protein GI: 147674214

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000000167513
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTAT TGCTACGTAC CACAGCCTTA ATGTTATTGC TGCTGAGCCG TGCTCCTGCC 
ATGGCGGCTG TGCCATTAAC CACCAATTCA ACGGAAGATA ACCGCGAAGA GTCACAACAA 
AACGAAGTCA GCTCTAAGCT GTTTCGTCAT AGCTTAAGTG GTTTGTACGG TATCGCTAAC 
CAAAATTACC CTATTGTCCA GCCTTATCAA GATTTTGATG TGCTGTACAG CAAAGCACAT 
CAAGCCCAAA TCGAGCTAGA AACTCTGTGC AAAAGCACCG CACTCTTGAC CCATACTCAA 
GCCTACTTTG CTGGCACAAA ATCTCGTCAG CGTGCTTTAG AAAAGGTTGA GCTAGAGTTA 
GATGGTCAGG CCGAGCGTAT TACCGATTTA GCCCGAGCCA CCATAGTGGC GCATGATGTG 
GCGAGTCTCG TCACCGCTTA TGAGACATTA AGTCGAGAAG CGACGGTCGT GAAAGTGAAA 
AACCGCTTCA AGAATCCGGC AGAATCTGGT TATCGCGATC TTAACGTTTT AGTTCAGTTA 
CCTAAAACAG GGATTATTGC TGAGGTTCAG TTGCATTTAG CGGCGATTGC GCAAGTAAAA 
AGTGGTGCAG AGCATGAGCT GTATGAGCAG ATCCAAACCA TTGAGCGCAC CGCGCGCCAA 
GAGCAACGTG AGTTAACCGA ATGGGAAAAT GCGCAAATTG CCAAGATGCG CTCAGCCTCA 
CGCGATCTCT ATCAACAAGC GTGGCAGCCT TACATCACAA CGCACATTCA AGCGGCATAA 

 

Protein sequence

MSLLLRTTAL MLLLLSRAPA MAAVPLTTNS TEDNREESQQ NEVSSKLFRH SLSGLYGIAN 
QNYPIVQPYQ DFDVLYSKAH QAQIELETLC KSTALLTHTQ AYFAGTKSRQ RALEKVELEL 
DGQAERITDL ARATIVAHDV ASLVTAYETL SREATVVKVK NRFKNPAESG YRDLNVLVQL 
PKTGIIAEVQ LHLAAIAQVK SGAEHELYEQ IQTIERTARQ EQRELTEWEN AQIAKMRSAS 
RDLYQQAWQP YITTHIQAA