Gene VC0395_A0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0844 
SymbolpheT 
ID5136996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp855920 
End bp858307 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content52% 
IMG OID640532302 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_001216790 
Protein GI147673806 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000714216 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA GCGAATCATG GCTTCGTGAG TGGGTTAACC CGGCAATTAC CACTGACGAA 
TTAACTCACC AAATTACAAT GGCGGGTCTG GAAGTGGATG ACGTACTGGC CGTAGCTGGT
GTGTTCGACG GCGTAAAAGT GGGTCACGTG GTTGAGTGTG CTCAACATCC AGATGCTGAC
AAACTGCGCG TCACCAAAGT CGATGTAGGC GAAGAAGAGC TTCTGGACAT CGTGTGTGGT
GCAGCCAACT GTCGTCAAGG TCTGAAAGTT GCGGTTGCAA CCGTAGGCGC GACGCTGCCA
GGCGATTTCA AGATTAAAAA AGCTAAACTG CGTGGCCAAC CGTCACACGG CATGCTGTGT
TCTTTCTCTG AGCTGGGTAT CGATGTTGAA TCGAACGGCA TCATGGAACT GGCTGAAAAC
GCACCGATTG GTATGGATTT CCGCGATTTT CTGTCACTGA ACGATGTGAC TATCGATGTG
GATTTGACGT CTAACCGCGC GGACTGTTTC AGCATCCGTG GTCTGGCTCG TGAAGTGGGC
GTATTGAACC GTGCGGACGT GACTGCTCCT GCGGTGAATG CGATTGTAGC AACCATCAAT
GATACGATTT CAATTGACGT GAAAGCGCCA GCGGCGTGTC CGCGTTACCT TGGTCGTATC
GTGAAGAACG TGAATGTTCA AGCGCAAACG CCACTCTGGA TGCAAGAAAA ACTGCGTCGT
TGTGGTATCC GCTCTATCGA TCCGGTGGTT GATATCACTA ACTTCGTGAT GCTGGAGCAA
GGCCAACCAA TGCACGCGTT TGATCTGGCG AAGATTGAAG GCGGAATCGT GGTTCGTCTG
GCTGAGCAAG ATGAAAAACT GACGCTGCTT GATGGCTCAG AAGCCAAATT AAACGCAGAT
ACGCTAGTGA TTGCTGACCA ACAAAAAGCG CTGGCGATTG CTGGTGTATT CGGTGGCGAG
CATTCTGGCG TCAGCACTGA CACCAAAGAT GTATTACTTG AGTGTGCGTT CTTCGCACCA
GACCACATTC GTGGTCGTGC ACGTAGCTAC GGCCTACACA CCGATTCTTC AATGCGTTTT
GAACGTGGTG TGGATTATGC TTTGCAACAC GCCGCGATGG AGCGTGCAAC GCAACTGCTG
GTTGAGATCT GTGGTGGTGA CGTTGCGCCA GTGGTAGCTG CAGAATCTGC GGCCGATTTA
CCAAAACCAA ACCAAGTTGC GCTGCGTCGT AGCAAGCTCG ACAAACTGCT GGGTCATGCG
ATTCCGGATG CGGACGTCGT GGAGATTCTA GAGCGTCTAG GCATGCAGGT CGAGACCACC
GCAGAAGGCT GGCAAGCGAC CGCGCCAACA TGGCGTTTTG ATATTGCTAT CGAGCAAGAT
CTGGTGGAAG AAGTTGGCCG TATCTATGGT TACAACAACA TTCCTAATCA AGCGTCAGTG
GCCGCGTTGA ACATGAACCT GCACAACGAA GCGAAATTAC CGCTGAAGCG TGTACGCGAT
CTGCTGGTTG ACCGTGGTTA CCAAGAAGCG ATCACCTATA GCTTCGTTGA GCCTGAGCAA
CAGAAACTGG TTGTACCGGG TGTTGATGCG CTGATCCTGC CAAACCCAAT TTCTGCTGAA
ATGTCAGCGA TGCGTTTGAG CTTGATCCAA GGTCTGCTGA ACACTGTGGT TCACAACCAG
AAACGTCAGC AACCTCGTGT TCGTTTGTTT GAATACGGTT TGCGCTTCAT TCCTGATGCG
GCGGCAGAAA ATGGCATGCG CCAAGAGCCT ATGCTGGCGG GTGTGATCTC TGGCGCTCGT
GGTGAAGAGC ACTGGAATAT GGAAACGGCA ACCGTTGATT TCTTCGATAT GAAGGGCGAT
CTGGAAGCGG TTCTTGAACT GACAGCGAAA GGCAAAGCCT ATAGCTTCGC AGCAACTAAG
CATCCAGCGC TGCATCCAGG TCAAGCTGCA GCGATTATGG TGGATGGCAA AGCGATCGGT
GTTATTGGTA CGGTTCACCC AGAACTTGAG CGTAAGTTTG GCCTCAATGG TCGCACTATT
GTGTTCGAGA TCGAGTGGAA TGCGATCAAC ACACGCGTGA TCCCAGAAGC CGCAGCGATT
TCTAAGTTCC CAGCCAACCG TCGTGATATC GCGTTGGTGG TCGATGGCAA CATCGCTTCT
GGCGACATCG TTGAAGCTTG CCGTGTGGCG GGTGGTGAGC TACTGAAAGA CGCAAAACTG
TTTGACGTTT ATGTCGGTAA AGGCGTGGAA GAAGGCAAGA AGAGCTTGGC GATTGCGCTG
ACGTTGCAAT CGGTTGAACG CACACTTGAA GAAGCGGATA TCGCAGCAGC GGTAGAGGCG
ATTGTGCAAG CCGTATCTGC CCAATTCGGC GCGGCTCTGC GCGACTAA
 
Protein sequence
MKFSESWLRE WVNPAITTDE LTHQITMAGL EVDDVLAVAG VFDGVKVGHV VECAQHPDAD 
KLRVTKVDVG EEELLDIVCG AANCRQGLKV AVATVGATLP GDFKIKKAKL RGQPSHGMLC
SFSELGIDVE SNGIMELAEN APIGMDFRDF LSLNDVTIDV DLTSNRADCF SIRGLAREVG
VLNRADVTAP AVNAIVATIN DTISIDVKAP AACPRYLGRI VKNVNVQAQT PLWMQEKLRR
CGIRSIDPVV DITNFVMLEQ GQPMHAFDLA KIEGGIVVRL AEQDEKLTLL DGSEAKLNAD
TLVIADQQKA LAIAGVFGGE HSGVSTDTKD VLLECAFFAP DHIRGRARSY GLHTDSSMRF
ERGVDYALQH AAMERATQLL VEICGGDVAP VVAAESAADL PKPNQVALRR SKLDKLLGHA
IPDADVVEIL ERLGMQVETT AEGWQATAPT WRFDIAIEQD LVEEVGRIYG YNNIPNQASV
AALNMNLHNE AKLPLKRVRD LLVDRGYQEA ITYSFVEPEQ QKLVVPGVDA LILPNPISAE
MSAMRLSLIQ GLLNTVVHNQ KRQQPRVRLF EYGLRFIPDA AAENGMRQEP MLAGVISGAR
GEEHWNMETA TVDFFDMKGD LEAVLELTAK GKAYSFAATK HPALHPGQAA AIMVDGKAIG
VIGTVHPELE RKFGLNGRTI VFEIEWNAIN TRVIPEAAAI SKFPANRRDI ALVVDGNIAS
GDIVEACRVA GGELLKDAKL FDVYVGKGVE EGKKSLAIAL TLQSVERTLE EADIAAAVEA
IVQAVSAQFG AALRD