Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0844 |
Symbol | pheT |
ID | 5136996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 855920 |
End bp | 858307 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640532302 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001216790 |
Protein GI | 147673806 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000714216 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCA GCGAATCATG GCTTCGTGAG TGGGTTAACC CGGCAATTAC CACTGACGAA TTAACTCACC AAATTACAAT GGCGGGTCTG GAAGTGGATG ACGTACTGGC CGTAGCTGGT GTGTTCGACG GCGTAAAAGT GGGTCACGTG GTTGAGTGTG CTCAACATCC AGATGCTGAC AAACTGCGCG TCACCAAAGT CGATGTAGGC GAAGAAGAGC TTCTGGACAT CGTGTGTGGT GCAGCCAACT GTCGTCAAGG TCTGAAAGTT GCGGTTGCAA CCGTAGGCGC GACGCTGCCA GGCGATTTCA AGATTAAAAA AGCTAAACTG CGTGGCCAAC CGTCACACGG CATGCTGTGT TCTTTCTCTG AGCTGGGTAT CGATGTTGAA TCGAACGGCA TCATGGAACT GGCTGAAAAC GCACCGATTG GTATGGATTT CCGCGATTTT CTGTCACTGA ACGATGTGAC TATCGATGTG GATTTGACGT CTAACCGCGC GGACTGTTTC AGCATCCGTG GTCTGGCTCG TGAAGTGGGC GTATTGAACC GTGCGGACGT GACTGCTCCT GCGGTGAATG CGATTGTAGC AACCATCAAT GATACGATTT CAATTGACGT GAAAGCGCCA GCGGCGTGTC CGCGTTACCT TGGTCGTATC GTGAAGAACG TGAATGTTCA AGCGCAAACG CCACTCTGGA TGCAAGAAAA ACTGCGTCGT TGTGGTATCC GCTCTATCGA TCCGGTGGTT GATATCACTA ACTTCGTGAT GCTGGAGCAA GGCCAACCAA TGCACGCGTT TGATCTGGCG AAGATTGAAG GCGGAATCGT GGTTCGTCTG GCTGAGCAAG ATGAAAAACT GACGCTGCTT GATGGCTCAG AAGCCAAATT AAACGCAGAT ACGCTAGTGA TTGCTGACCA ACAAAAAGCG CTGGCGATTG CTGGTGTATT CGGTGGCGAG CATTCTGGCG TCAGCACTGA CACCAAAGAT GTATTACTTG AGTGTGCGTT CTTCGCACCA GACCACATTC GTGGTCGTGC ACGTAGCTAC GGCCTACACA CCGATTCTTC AATGCGTTTT GAACGTGGTG TGGATTATGC TTTGCAACAC GCCGCGATGG AGCGTGCAAC GCAACTGCTG GTTGAGATCT GTGGTGGTGA CGTTGCGCCA GTGGTAGCTG CAGAATCTGC GGCCGATTTA CCAAAACCAA ACCAAGTTGC GCTGCGTCGT AGCAAGCTCG ACAAACTGCT GGGTCATGCG ATTCCGGATG CGGACGTCGT GGAGATTCTA GAGCGTCTAG GCATGCAGGT CGAGACCACC GCAGAAGGCT GGCAAGCGAC CGCGCCAACA TGGCGTTTTG ATATTGCTAT CGAGCAAGAT CTGGTGGAAG AAGTTGGCCG TATCTATGGT TACAACAACA TTCCTAATCA AGCGTCAGTG GCCGCGTTGA ACATGAACCT GCACAACGAA GCGAAATTAC CGCTGAAGCG TGTACGCGAT CTGCTGGTTG ACCGTGGTTA CCAAGAAGCG ATCACCTATA GCTTCGTTGA GCCTGAGCAA CAGAAACTGG TTGTACCGGG TGTTGATGCG CTGATCCTGC CAAACCCAAT TTCTGCTGAA ATGTCAGCGA TGCGTTTGAG CTTGATCCAA GGTCTGCTGA ACACTGTGGT TCACAACCAG AAACGTCAGC AACCTCGTGT TCGTTTGTTT GAATACGGTT TGCGCTTCAT TCCTGATGCG GCGGCAGAAA ATGGCATGCG CCAAGAGCCT ATGCTGGCGG GTGTGATCTC TGGCGCTCGT GGTGAAGAGC ACTGGAATAT GGAAACGGCA ACCGTTGATT TCTTCGATAT GAAGGGCGAT CTGGAAGCGG TTCTTGAACT GACAGCGAAA GGCAAAGCCT ATAGCTTCGC AGCAACTAAG CATCCAGCGC TGCATCCAGG TCAAGCTGCA GCGATTATGG TGGATGGCAA AGCGATCGGT GTTATTGGTA CGGTTCACCC AGAACTTGAG CGTAAGTTTG GCCTCAATGG TCGCACTATT GTGTTCGAGA TCGAGTGGAA TGCGATCAAC ACACGCGTGA TCCCAGAAGC CGCAGCGATT TCTAAGTTCC CAGCCAACCG TCGTGATATC GCGTTGGTGG TCGATGGCAA CATCGCTTCT GGCGACATCG TTGAAGCTTG CCGTGTGGCG GGTGGTGAGC TACTGAAAGA CGCAAAACTG TTTGACGTTT ATGTCGGTAA AGGCGTGGAA GAAGGCAAGA AGAGCTTGGC GATTGCGCTG ACGTTGCAAT CGGTTGAACG CACACTTGAA GAAGCGGATA TCGCAGCAGC GGTAGAGGCG ATTGTGCAAG CCGTATCTGC CCAATTCGGC GCGGCTCTGC GCGACTAA
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Protein sequence | MKFSESWLRE WVNPAITTDE LTHQITMAGL EVDDVLAVAG VFDGVKVGHV VECAQHPDAD KLRVTKVDVG EEELLDIVCG AANCRQGLKV AVATVGATLP GDFKIKKAKL RGQPSHGMLC SFSELGIDVE SNGIMELAEN APIGMDFRDF LSLNDVTIDV DLTSNRADCF SIRGLAREVG VLNRADVTAP AVNAIVATIN DTISIDVKAP AACPRYLGRI VKNVNVQAQT PLWMQEKLRR CGIRSIDPVV DITNFVMLEQ GQPMHAFDLA KIEGGIVVRL AEQDEKLTLL DGSEAKLNAD TLVIADQQKA LAIAGVFGGE HSGVSTDTKD VLLECAFFAP DHIRGRARSY GLHTDSSMRF ERGVDYALQH AAMERATQLL VEICGGDVAP VVAAESAADL PKPNQVALRR SKLDKLLGHA IPDADVVEIL ERLGMQVETT AEGWQATAPT WRFDIAIEQD LVEEVGRIYG YNNIPNQASV AALNMNLHNE AKLPLKRVRD LLVDRGYQEA ITYSFVEPEQ QKLVVPGVDA LILPNPISAE MSAMRLSLIQ GLLNTVVHNQ KRQQPRVRLF EYGLRFIPDA AAENGMRQEP MLAGVISGAR GEEHWNMETA TVDFFDMKGD LEAVLELTAK GKAYSFAATK HPALHPGQAA AIMVDGKAIG VIGTVHPELE RKFGLNGRTI VFEIEWNAIN TRVIPEAAAI SKFPANRRDI ALVVDGNIAS GDIVEACRVA GGELLKDAKL FDVYVGKGVE EGKKSLAIAL TLQSVERTLE EADIAAAVEA IVQAVSAQFG AALRD
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