Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0835 |
Symbol | pgsA |
ID | 5136687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 851569 |
End bp | 852126 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532293 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_001216785 |
Protein GI | 147673568 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000000151651 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTCA ACATTCCTAA CCTTCTCTCC TTGCTCAGAT TATTTCTGAT CCCCGTGTTT GTGGTGACCT TTTATCTCCC TTTTGAATGG GCTCCCTTTG TCGCCGCTAT GGTGTTTTGG GTGGCTGGAT TCACTGATTG GTTAGATGGA ATGTTGGCGC GAAAATTAGG CCAAACCTCG CGTTTTGGTG CATTTATTGA CCCAGTAGCG GATAAAGTAC TGGTTGCCAC GGCGCTGATT TTGATCACCG AACATTACCA CAGTATCTGG ATCACCATTC CTGCGGTGAC CATGATCGCT CGCGAAATCA TCATTTCAGC ACTGCGTGAG TGGATGGCAG AAATTGGCAA ACGAGCCAGT GTCGCAGTGT CATGGGTTGG CAAAGTAAAA ACTCTGACTC AAATGTTTGC GCTGTGGGTA CTGATCTGGC GTTATGACGA CTGGATGATT TGGCTTGGCT ACATTTCTAT CTATGTGGCG ACTGTGCTGA CCTATTGGTC AATGGTGCAA TATTTGGCGG CGGCCAAAGA CGACTTACTG AATGAAGAAC ATCACTAG
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Protein sequence | MRFNIPNLLS LLRLFLIPVF VVTFYLPFEW APFVAAMVFW VAGFTDWLDG MLARKLGQTS RFGAFIDPVA DKVLVATALI LITEHYHSIW ITIPAVTMIA REIIISALRE WMAEIGKRAS VAVSWVGKVK TLTQMFALWV LIWRYDDWMI WLGYISIYVA TVLTYWSMVQ YLAAAKDDLL NEEHH
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