| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0789 |
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| Symbol | |
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| ID | 5135667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 798848 |
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| End bp | 799585 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532247 |
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| Product | prophage MuSo2, Cro/CI family transcriptional regulator |
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| Protein accession | YP_001216739 |
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| Protein GI | 147673724 |
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| COG category | [K] Transcription |
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| COG ID | [COG2932] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000234402 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACA CTTACAACAA AAATGCGGCA GGAAAAGACA AAAATGCGGA TCACATTTTT
GAAATCAAAG GAATAATGCG ATTCCCCGAA AGGCTAAAGG AAGCTATTGG GGATATTTCA
ATTCGCAGCT TTGCGAAGAA ATGTGGACTA TCCGAGGCGG TTGTGCGCAA TTATCTAGGC
GGAAAAACAT TCCCATCCTT AGATAAGCTC GCGCTGATAT CAGAAATCAG CAACAAACCA
CTTGAATGGC TATGTTCAGG AGCCACAACC GATTATTCAG TTAGTGAGCC ATCTGCCTTT
TATAGCATCC CCATGGATGA GTTCGTGATG ATACCTGGCT ATCGAATACA GGTTTCAGCA
GGTCACGGCG CGCTTAACCC AGAGAATATG GAGCCGACTC GGTATCTGGC ATTTCGCCGT
AAGTGGCTGA ACTATAGAGG GTTCAACGAA AAGGATTTAG CGATCGTGTG GGCAAAGGGC
GACAGCATGG AGCCCACGAT CCACAACAAT GACACGCTTG TAGTTCACAT GGCTAGGAAC
AAGCCGCAAG ATGGACACAT CTATATTTTC AGGAATGGTG ATGAGCTTTT TGTGAAGCGG
TACCAGTCAA TGTTAGGAAC ATGGCGACTG ATAAGCGACA ACCCTATATA TGACAAGCTG
GATATTCCAA AGCATGAACA GCACCAGTTT GATGTGGTTG GTCAGGTAGT TCACATCGCC
AAAGACATCG GAGATTGA
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| Protein sequence | MSDTYNKNAA GKDKNADHIF EIKGIMRFPE RLKEAIGDIS IRSFAKKCGL SEAVVRNYLG
GKTFPSLDKL ALISEISNKP LEWLCSGATT DYSVSEPSAF YSIPMDEFVM IPGYRIQVSA
GHGALNPENM EPTRYLAFRR KWLNYRGFNE KDLAIVWAKG DSMEPTIHNN DTLVVHMARN
KPQDGHIYIF RNGDELFVKR YQSMLGTWRL ISDNPIYDKL DIPKHEQHQF DVVGQVVHIA
KDIGD
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