Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0644 |
Symbol | purB |
ID | 5136543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 684105 |
End bp | 685475 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640532102 |
Product | adenylosuccinate lyase |
Protein accession | YP_001216594 |
Protein GI | 147675052 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTGT CAGCATTGAC TGCTGTTTCA CCGGTAGATG GCCGCTACGG AAGTAAAACG ATTGCGTTAC GCAGTATCTT CAGTGAGTTT GGTCTCCTAA AGTACCGCAC TATCGTTGAA ATTCGCTGGC TACAAAAGCT AGCCGCCACT GCTGAGATCG CAGAAGTGCC TGCATTCAGT GCCGAAGCGA ATCAATTCCT TGATGCGATT GCCGCCAACT TCAATGAGGC GGATGCACTC CGTATCAAAG AGATTGAACG CACCACCAAC CACGATGTAA AAGCCGTGGA ATACTTCCTG AAAGAGAAAG TAGCGGCCAT GCCTGAGCTG CATGCCGTCA ACGAGTTCAT TCACTTTGCT TGTACTTCCG AAGACATCAA CAACACTTCA CATGCGTTGA TGCTCAAAGA AGCGCGTGAC ACGGTGATCC TGCCTGAAAT TCGCAACGTG ATTGACGCAA TTCGCAAACT GGCCGAAGAG TACCGCGATA TTCCGCTGCT TTCTCGTACT CACGGTCAGC CAGCCTCTCC ATCGACCATG GGTAAAGAGA TGGCGAACGT GGCCTACCGC ATGGAGCGCC AATACAAGCA GATCGCTAAC GTAGAAATCC TAGCCAAAAT CAACGGTGCG GTGGGTAACT ACAACGCGCA CCTTTCTGCT TACCCAACGG TAGATTGGCA TAAATTCAGC GAAGAGTTCA TCACTGAATC TTTGGGCGTA GATTGGAACC CGTACACCAC GCAAATCGAG CCGCATGATT ACATTGCTGA GCTGTTTGAA GCGGTGGCAC GTTTTAACAC CATCTTGATC GATTTTGATC GTGATGTTTG GGGTTACATT GCCCTGGGCC ACTTCAAACA AAGAACCATC GCGGGTGAAA TTGGTTCTTC TACCATGCCA CACAAAGTCA ACCCAATCGA CTTTGAAAAC TCAGAAGGTA ACTTGGGTCT GGCGAATGCG GTATTTACCC ATTTAGCGCA AAAGCTGCCT ATCTCTCGTT GGCAACGTGA CCTAACGGAT TCTACCGTGC TGCGTAACCT CGGTGTGGGT GTCGGCTATG CCATCATCGC TTATACCTCA ACTTTGAAAG GCATCAGCAA GCTGGAAGTG AACCGTGACG CACTACTTGC AGAACTGGAT CACAACTGGG AAGTTCTGGC AGAGCCAATC CAAACTGTGA TGCGCCGCTA CGGCATTGAA AAGCCATATG AGAAGCTCAA AGAACTGACT CGTGGTAAGC GAGTAGATGG CGAAGCGATG CGTCAATTCA TTGATGGTTT AGCACTGCCA GCGGAAGAGA AAACTCGCTT GAAAGCCATG ACACCAGCCA GCTATATTGG CTACGCGATT GAGCTGACGG ACAAGCTGTA A
|
Protein sequence | MELSALTAVS PVDGRYGSKT IALRSIFSEF GLLKYRTIVE IRWLQKLAAT AEIAEVPAFS AEANQFLDAI AANFNEADAL RIKEIERTTN HDVKAVEYFL KEKVAAMPEL HAVNEFIHFA CTSEDINNTS HALMLKEARD TVILPEIRNV IDAIRKLAEE YRDIPLLSRT HGQPASPSTM GKEMANVAYR MERQYKQIAN VEILAKINGA VGNYNAHLSA YPTVDWHKFS EEFITESLGV DWNPYTTQIE PHDYIAELFE AVARFNTILI DFDRDVWGYI ALGHFKQRTI AGEIGSSTMP HKVNPIDFEN SEGNLGLANA VFTHLAQKLP ISRWQRDLTD STVLRNLGVG VGYAIIAYTS TLKGISKLEV NRDALLAELD HNWEVLAEPI QTVMRRYGIE KPYEKLKELT RGKRVDGEAM RQFIDGLALP AEEKTRLKAM TPASYIGYAI ELTDKL
|
| |