| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0637 |
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| Symbol | |
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| ID | 5137486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 678393 |
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| End bp | 679118 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532095 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001216587 |
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| Protein GI | 147675476 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000368636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGG TGTTCATTAC CGGTGCGACC TCCGGAATTG GTAAACAACT GGCGTTGGAT
TATGCCAAAC AGGGTTGGCA AGTGATTGCG TGTGGACGTA ATCAGTCGGT GTTAGACAGC
TTACATACAC AATATGCCAA CATTTTTCCC TTGGCGTTTG ATGTCACCGA TCATCCCGGT
ACAAAAGCGG CATTAGCGCA GCTTCCATGT CAGCCGGAAC TCTGGATTTT AAATGCAGGC
GATTGTGAGT ACATCGACGA TGGCAAGATG GATGTCACAC TGATGGCACG TGTGTTCAAT
ATCAATGTGC TTGGCGTAGC GGCGGTGATT GAAGGTATAC AGCCACATTT GTCCTGTGGT
CACCGTGTGG CGATTGTTGG CTCGATTGCC AGTGAGCTGG CCTTGCCGCG AGCAGAAGCT
TATGGCGCTT CCAAAGCGGC CGTCGCTTAT TTAGCACGAA CGCTTCAACT CGATTGGCGT
CCACTTGGTA TCGAAGTCAC CACCATTTTT CCGGGCTTTG TCGCCACACC ACTCACGGAT
CGCAATACTT TTGCCATGCC CATGATCATC ACAGTAGAGC GTGCCGCCCA GGAGATCAAA
GCTGGCTTGG CGCGCGGTGT GTCACAACTC TATTTCCCTA AACGATTTAC TTGGCTGATT
CGGTTACTCG GTGCTTTGCC TTATGCATGG CAAGGTCGCT TAGTTCGACG TCTGTTGAAG
GCTTAA
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| Protein sequence | MTAVFITGAT SGIGKQLALD YAKQGWQVIA CGRNQSVLDS LHTQYANIFP LAFDVTDHPG
TKAALAQLPC QPELWILNAG DCEYIDDGKM DVTLMARVFN INVLGVAAVI EGIQPHLSCG
HRVAIVGSIA SELALPRAEA YGASKAAVAY LARTLQLDWR PLGIEVTTIF PGFVATPLTD
RNTFAMPMII TVERAAQEIK AGLARGVSQL YFPKRFTWLI RLLGALPYAW QGRLVRRLLK
A
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