Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0636 |
Symbol | |
ID | 5135344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 677968 |
End bp | 678396 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640532094 |
Product | putative transcriptional regulator |
Protein accession | YP_001216586 |
Protein GI | 147673637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000220026 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTA TGGACGTACA ACACGTCGCG CAGTTTTATC AACAATTAGA TAAAAGCCAA TTACATAGGC TGATTGAAAT CTATCATCCT GATGTGGTGT TTGAAGATGC CGCACATCGC ATCGAAGGGT TTGACGCCCT TTACCAGTAT TTTTTGAATC TTTACCAAAA CGTCCATACC TGTACTTTTA CCATTCATGA GCAGTATGCG GTCAATGAGG GCGCGTTTTT GGTCTGGACC ATGCATTTAC GTCACCCAAA ATTAGCCAAG GGCGAACAGG TGGATGTGAA AGGCGTGAGC CACTTGCACT TTGCCGAGGG CAAAGTGACC TACCATCGCG ATTATTTCGA TATGGGGGAA ATGCTTTATG AGCAATTGCC TGTGCTTGGG CAAGTTATCC GCGCGATTAA GCGGAGACTA GGACAATGA
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Protein sequence | MSIMDVQHVA QFYQQLDKSQ LHRLIEIYHP DVVFEDAAHR IEGFDALYQY FLNLYQNVHT CTFTIHEQYA VNEGAFLVWT MHLRHPKLAK GEQVDVKGVS HLHFAEGKVT YHRDYFDMGE MLYEQLPVLG QVIRAIKRRL GQ
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