| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0611 |
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| Symbol | oppC |
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| ID | 5135904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 652130 |
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| End bp | 653032 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532069 |
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| Product | oligopeptide ABC transporter, permease protein |
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| Protein accession | YP_001216561 |
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| Protein GI | 147674611 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACGA AAAAAGAAAA TTTAGCGGCG ATTGAAAACT TCTCACAAAA CCTTGAGATT
CAAGGTCGCA GCCTGTGGCA AGACGCGCGT ATTCGCTTTA TGCGTAACAA AGCCGCGATG
GTCAGCCTGT TTGTTTTGAT GTTAATCACC CTGGCAGTCG TCTTTCTGCC GATGTTTTCC
GCTTACAGTT ATGAAGATAC GGACTGGTAT GCCATGCACG CTGGACCTTC AGCGGAGCAC
TGGTTTGGTA CTGATGCTCT TGGTCGCGAC CTCTTTGTGC GCACGCTCGT GGGTGGTCGT
ATCTCACTGA TGGTCGGCAT CATGGGGGCA TTGGTTGCAG TACTGATCGG TACTTTGTAT
GGCGCGGCCT CAGGTTTTAT CGGTGGCCGT ACTGACCGTG TAATGATGCG TATTCTGGAA
ATTCTGTACG CTATCCCATT CATGTTCTTG GTGATTGTAT TAGTGACGTT TTTTGGTCGT
AACATCGTGC TGATCTTCGT CGCGATTGGG GCAATCGCAT GGCTGGATAT GGCGCGTATT
GTGCGCGGCC AAACCTTGAG CCTACGTAGC AAAGAGTTTA TCGAAGCGGC GCATGTGTGT
GGTGTGAGTA AGTGGAACAT TATTACGCGC CATATTGTGC CAAACGTATT GGGCATTGTA
GCGGTTTACT CCACCCTGCT GATCCCAAGC ATGATTTTGA CCGAATCTTT CCTTTCTTTC
CTTGGTCTTG GTGTTCAAGA GCCGATGACA AGCTGGGGCG CGCTGTTACA AGAGGGCGCT
AACACAATGG AAGTGGCTAT TTGGCAACTG CTATTCCCCG CCGCATTCAT GGTGTTGACC
TTGTTCTGCT TTAACTATGT CGGCGACGGT CTGCGTGACG CGCTCGATCC AAAAGACAGA
TAA
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| Protein sequence | MLTKKENLAA IENFSQNLEI QGRSLWQDAR IRFMRNKAAM VSLFVLMLIT LAVVFLPMFS
AYSYEDTDWY AMHAGPSAEH WFGTDALGRD LFVRTLVGGR ISLMVGIMGA LVAVLIGTLY
GAASGFIGGR TDRVMMRILE ILYAIPFMFL VIVLVTFFGR NIVLIFVAIG AIAWLDMARI
VRGQTLSLRS KEFIEAAHVC GVSKWNIITR HIVPNVLGIV AVYSTLLIPS MILTESFLSF
LGLGVQEPMT SWGALLQEGA NTMEVAIWQL LFPAAFMVLT LFCFNYVGDG LRDALDPKDR
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