| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0578 |
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| Symbol | |
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| ID | 5135805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 618438 |
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| End bp | 619499 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532036 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001216528 |
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| Protein GI | 229259766 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000048636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGTTTT TGTTAGATTA CGGCCTGTTT TTGGCCAAGA TTGTGACTGT GGTAGTCGCA
TTGGTCGCAG TACTAGTGAT AGTAAAATCA TTGGGCGGAC GCAGTGGTGG TGCCAAAGGG
GAGTTGGAAA TCACCGATCT GACCGAACAG CATAAAGAGA CGGTTGAGCG TTTAGAGGCT
TATCTGCATG ACGAAGCGTT TTTAAAAGCG CGCGATAAAG CGGATAAGAA GAAAGAAAAA
GCTGAGCAGA AAAGTCGTGA AAAGTCGCTT AAGCAAGCGG CGAAAGAAGG TGAATTGGAA
AGCAAACGCG ATCCGCATCT GTTTGTGCTT GATTTTCACG GCAGTATTGA TGCGAAAGAA
GTCGCTTCAC TGCGTGAAGA GGTGAGCGCG ATTTTGGCGG TGGCACAAGC GGGTGATGAA
GTGCTGCTGC GTTTGGAAAC TGGTGGCGGC ATGGTGCATG GTTATGGTTT GGCATCATCA
CAACTGGATC GCCTTAAAGC GGCTGGCTTA CCGCTGACGA TTGCGGTAGA TAAAGTTGCA
GCTAGCGGCG GTTATATGAT GGCCTGCATC GCTGATAAAA TCGTCAGTGC GCCATTTGCG
ATTGTCGGAT CTATCGGTGT GGTGGCTCAG TTACCAAACT TCCATAAACT GCTGAAAAAG
AACGATATCG AGTTTGAACA GCTCACGGCG GGCGAATACA AGCGCACCTT AACCATGTTT
GGTGAAAACA CCGATAAAGC GCGTGAAAAG TTCAAGCAAG AGCTGGAAGA AACACATCAA
CTGTTCAAAG ACTTTATCCG TGAGCATCGA CCCGCGTTGG ATCTCGATAA AGTCGCGACA
GGTGAACACT GGTTTGGCAC GCAGGCCAAA GCTCTGGGGT TGGTCGATGA GATTCAAACG
TCCGATGATT TGATTGTTGC CGCGTGCAAG AGCAAAACCG TACTTCTGCT GCGTTATACG
CAAAAGAAAA AGCTGGCCGA TAAACTGGCC GGAGTGGCCG GTGATGCCGC CGACAATGTG
TTGCTGAAAC TGATCAGTCG AGGCCAACGT CCCTTGGTTT AA
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| Protein sequence | MEFLLDYGLF LAKIVTVVVA LVAVLVIVKS LGGRSGGAKG ELEITDLTEQ HKETVERLEA
YLHDEAFLKA RDKADKKKEK AEQKSREKSL KQAAKEGELE SKRDPHLFVL DFHGSIDAKE
VASLREEVSA ILAVAQAGDE VLLRLETGGG MVHGYGLASS QLDRLKAAGL PLTIAVDKVA
ASGGYMMACI ADKIVSAPFA IVGSIGVVAQ LPNFHKLLKK NDIEFEQLTA GEYKRTLTMF
GENTDKAREK FKQELEETHQ LFKDFIREHR PALDLDKVAT GEHWFGTQAK ALGLVDEIQT
SDDLIVAACK SKTVLLLRYT QKKKLADKLA GVAGDAADNV LLKLISRGQR PLV
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