Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0560 |
Symbol | fadL-1 |
ID | 5136469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 600655 |
End bp | 601953 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532018 |
Product | long-chain fatty acid transport protein |
Protein accession | YP_001216510 |
Protein GI | 147675389 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00871251 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA ATAAGACTCT CCTCTCCTGT GCTGTGGCTT TCGGTTTAGC CAGCGTTTCT ACCTTTACTC AAGCGGCAGG TTTCCAGCTT GCTGAATATT CAGCAACGGG TCTTGGCCGT GCTTACGCCG GTGAAGCCGC GATGGCAGAC AATGCCAGCG CACAATGGCG CAACCCTGCA ATGCTGACCT ATTTAGAGGG CACTCAAGTT TCTGCCGGCG CAATTTACGT GAATCCAAAC GTGGATGTTG AGGGTACAGT AAACCACGCA CAACTAGGTA AAACTCACGC ATCTTCAAAC GATTTTGCCC ACGATGCAGT GATTCCGAAT TTCTACCTGT CACACCATTT AAACGAACAA GTGGCACTGG GTTTTGCTCT TGGTACTAAC TACGGTATGG AAACGGATCT GGGTACTGAG TTTGCAGCCT CTCACTTTGG CAGCCAAGCG AGCGTGATCA GCAAAGAAGC GAACCTCAAT ATTGCTTACC AAATCTTGCC TCAATTGAGT ATTGGTGGCG GTGTGCGTTA TGTGATGGGT GAAGGTCATT TCGGTGCAAC TGCGCCAGCA AAAAATCTGA TTCGTCATCC TATTACTAAC AACGTCATGA CTTTACCTAA AGGTACAACA TTAAAATATA TGGAAGGTGA AGATAACTCT TGGGGTTGGC AAGTAGGCAG CGCATGGCAA ATCAATCAAG ATCACCGCGT AGGTTTCGCC TATAAATCGG AAGTGGTGAT GGATTTTGAA GGCCATGCAG AAGGAGTCAG TTACGGTAGT TATAAACCCG GCATGATGTC TGTGACTCTA CCGGCGACGG CTGAACTGGC AAGCTTCCAC CAACTCAATG ACCAGTGGGC GATTCACGCT AGCATTAACT GGACAGATTG GAGTTCATTC AAAGAGTTGA CAGCTGTGTT CCCAGAAAAA TCTGACCTCA TCAAATCAGA AAACTGGGAA GACAACTACC GCTTTGCTTT GGGCACAACG TATCAATACG ATGCTAAACT CGCTCTGCGT GCGGGCGTCG CATACGACAC ATCAGCGGTA GACGATAAAA ACCGCACAGC AACCATCCCG GAAACAGACC GTACTTGGGT AAGTGTCGGC GGTAGTTATG TTGCAACGCC ACAACTGACT CTCGATGCCG GTTTTACCTA TATCTTTGCG AAAGATGCCA CCATCAACGA ACCTCGTGAC GCTTCAGACC AAACTGCAGC CGCAATCGGT GGTGCATTTA CGGGCAATGT ATCAGGCAAT GTATGGCTGA TCGGTGTTCA AGCGAACTAC CGCTTCTAA
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Protein sequence | MKTNKTLLSC AVAFGLASVS TFTQAAGFQL AEYSATGLGR AYAGEAAMAD NASAQWRNPA MLTYLEGTQV SAGAIYVNPN VDVEGTVNHA QLGKTHASSN DFAHDAVIPN FYLSHHLNEQ VALGFALGTN YGMETDLGTE FAASHFGSQA SVISKEANLN IAYQILPQLS IGGGVRYVMG EGHFGATAPA KNLIRHPITN NVMTLPKGTT LKYMEGEDNS WGWQVGSAWQ INQDHRVGFA YKSEVVMDFE GHAEGVSYGS YKPGMMSVTL PATAELASFH QLNDQWAIHA SINWTDWSSF KELTAVFPEK SDLIKSENWE DNYRFALGTT YQYDAKLALR AGVAYDTSAV DDKNRTATIP ETDRTWVSVG GSYVATPQLT LDAGFTYIFA KDATINEPRD ASDQTAAAIG GAFTGNVSGN VWLIGVQANY RF
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