| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0527 |
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| Symbol | rnt |
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| ID | 5137077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 568156 |
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| End bp | 568887 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531985 |
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| Product | ribonuclease T |
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| Protein accession | YP_001216478 |
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| Protein GI | 147675730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000101499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCTCCACC GCAGAATCTG CAATAATGCC AGCCTTATCA CACAATTTAG AACCCGCATG
ACTGATAAAA ATGACGCGCT AACCTTGAAA AAACGCTTTC GTGGCTATTT TCCTGTGGTT
ATCGATGTAG AGACCGCAGG ATTCAATGCG CAAACCGATG CGCTTTTAGA AATTTGTGCT
GTCACCTTGA GTATGGATGA AAACGGCGAT TTACACCCAG CAAGTACTAT CCATTTTCAT
GTCGAACCCT TTGAAGGCGC GAATCTCGAA AAAGCCGCAC TAGAATTTAC CGGCATTTAC
GATCCGTTTA GCCCACTACG GGGGGCGGTG AGTGAAGATC ATGCATTAAA AGAGATTTAC
AAACTGGTTC GCAAAGAGCA AAAAGCCGCA GATTGCAGCC GCGCCATTAT TGTGGCGCAT
AACGCGCATT TCGATCACAG TTTCGTGATG GCCGCGAGCG AACGTTGTAA ATTAAAACGT
GTTCCTTTCC ATCCCTTTGC CACGTTTGAC ACGGCAACGC TAAGTGGTCT TGCTTTCGGG
CAGACCGTGC TGGCTAAAGC CTGTAAAACT GCTGGGATGG AATTTGACAA TCGCGAGGCA
CATTCCGCCT TGTACGATAC CCAAAAAACT GCAGAGCTGT TCTGCACCAT TGTCAACCAG
TGGAAAGCTT TAGGTGGCTG GCCATTGGTC AATGATGATG AGGACAATAA CAACGATGCC
GATTTAGATT GA
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| Protein sequence | MLHRRICNNA SLITQFRTRM TDKNDALTLK KRFRGYFPVV IDVETAGFNA QTDALLEICA
VTLSMDENGD LHPASTIHFH VEPFEGANLE KAALEFTGIY DPFSPLRGAV SEDHALKEIY
KLVRKEQKAA DCSRAIIVAH NAHFDHSFVM AASERCKLKR VPFHPFATFD TATLSGLAFG
QTVLAKACKT AGMEFDNREA HSALYDTQKT AELFCTIVNQ WKALGGWPLV NDDEDNNNDA
DLD
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