Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0526 |
Symbol | |
ID | 5136558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 566730 |
End bp | 568055 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640531984 |
Product | hypothetical protein |
Protein accession | YP_001216477 |
Protein GI | 147673585 |
COG category | [R] General function prediction only |
COG ID | [COG2056] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000134794 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCCAG TAGTCATTTC CGTTTGTGTC ATGCTGCTGC TAGCCCTGAT GCGGGTGAAC GTCGTGGTTG CTTTGACGTT CAGTGCCGTG ATCGGTGGTT TAGTCGCTGG TATGAGTTTG AATGAAACCG TTGCCGCATT TGAAAGCGGT TTGGGTGGTG GCGCCACGAT CGCCCTGAGT TACGCCATGC TTGGCACCTT TGCGGTGGCC ATTTCGAAAT CGGGGATCAC CGATTTACTG GCGCAAAGCG TGATTCGTCG CATTCACGGC CAAGAAAGCC ACGCAGCATC AACCGGGTTA AAATACCTCG TACTCATCTC TTTGCTGCTG ATGGCGATGG CCTCACAAAA CGTCATCCCC GTCCACATTG CGTTTATCCC CATTTTGATC CCGCCGCTCC TGAGTGTCTT TGCTAAGCTG AAACTCGACC GTCGCTTAGT CGCCTGCGTC CTCACTTTTG GCTTGATCAC CCCCTACATG GTGCTTCCCG TCGGTTTTGG CGGCATTTTC CTCAACAACA TTTTGCTAAA AAACCTGCAT GAAAATGGTT TGGAAAGCAT CACCGCAAGC CAAGTTCCCA CGGCGATGAT TTTGCCCGCA GCTGGGATGA TTTTTGGTCT GTTGCTGGCG GTACTTTTTA GCTATCGCAA ACCTCGTGAG TATCAAGAAA CGGAATTGAC CGTAGTGCAA CAAGAAAGCT CGTCGATCAA TAAACAGCAT ATCGCGATTG CGGGTGTCGG CATTGTGGCT GCATTAGCGG TGCAATTGTT GACGGGGTCT ATGATCATTG GCGCACTAGC AGGCTTTATG GTATTCACTT TTGGGGGCGT GATTGCGTGG AAAGAGACGC ATGATGTGTT CACAAGAGGC GTGCATATGA TGGCGATGAT TGGCTTTATC ATGATTTCTG CGGCCGGTTT TGCCGCAGTG ATGAAAGCCA CTGGCGGCGT TGAAACACTG GTCACTTCGC TTTCCACCAG CATTGGTGAC AATAAAGCTC TAGCAGCTCT GCTGATGTTA GTCGTAGGCT TGTTGGTGAC TATGGGCATC GGCTCGTCAT TCTCGACCAT TCCGATCATC GCAACCATCT ATGTGCCGCT GTGTCTTTCG TTTGGTTTTT CCCCAATGGC CACCGTTGCT CTGGTCGGTA CCGCCGCTGC GTTAGGAGAT GCAGGATCTC CTGCGTCCGA TTCAACCTTA GGCCCAACAT CCGGCCTCAA TGCGGATGGT CAGCACGAGC ATATTTGGGA AACCGTTGTG CCAACCTTTA TTCACTACAA TCTGCCACTC ATCGTATTCG GTTGGATTGC CGCCATGGTG CTGTAA
|
Protein sequence | MNPVVISVCV MLLLALMRVN VVVALTFSAV IGGLVAGMSL NETVAAFESG LGGGATIALS YAMLGTFAVA ISKSGITDLL AQSVIRRIHG QESHAASTGL KYLVLISLLL MAMASQNVIP VHIAFIPILI PPLLSVFAKL KLDRRLVACV LTFGLITPYM VLPVGFGGIF LNNILLKNLH ENGLESITAS QVPTAMILPA AGMIFGLLLA VLFSYRKPRE YQETELTVVQ QESSSINKQH IAIAGVGIVA ALAVQLLTGS MIIGALAGFM VFTFGGVIAW KETHDVFTRG VHMMAMIGFI MISAAGFAAV MKATGGVETL VTSLSTSIGD NKALAALLML VVGLLVTMGI GSSFSTIPII ATIYVPLCLS FGFSPMATVA LVGTAAALGD AGSPASDSTL GPTSGLNADG QHEHIWETVV PTFIHYNLPL IVFGWIAAMV L
|
| |