Gene VC0395_A0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0526 
Symbol 
ID5136558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp566730 
End bp568055 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content51% 
IMG OID640531984 
Producthypothetical protein 
Protein accessionYP_001216477 
Protein GI147673585 
COG category[R] General function prediction only 
COG ID[COG2056] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000134794 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAG TAGTCATTTC CGTTTGTGTC ATGCTGCTGC TAGCCCTGAT GCGGGTGAAC 
GTCGTGGTTG CTTTGACGTT CAGTGCCGTG ATCGGTGGTT TAGTCGCTGG TATGAGTTTG
AATGAAACCG TTGCCGCATT TGAAAGCGGT TTGGGTGGTG GCGCCACGAT CGCCCTGAGT
TACGCCATGC TTGGCACCTT TGCGGTGGCC ATTTCGAAAT CGGGGATCAC CGATTTACTG
GCGCAAAGCG TGATTCGTCG CATTCACGGC CAAGAAAGCC ACGCAGCATC AACCGGGTTA
AAATACCTCG TACTCATCTC TTTGCTGCTG ATGGCGATGG CCTCACAAAA CGTCATCCCC
GTCCACATTG CGTTTATCCC CATTTTGATC CCGCCGCTCC TGAGTGTCTT TGCTAAGCTG
AAACTCGACC GTCGCTTAGT CGCCTGCGTC CTCACTTTTG GCTTGATCAC CCCCTACATG
GTGCTTCCCG TCGGTTTTGG CGGCATTTTC CTCAACAACA TTTTGCTAAA AAACCTGCAT
GAAAATGGTT TGGAAAGCAT CACCGCAAGC CAAGTTCCCA CGGCGATGAT TTTGCCCGCA
GCTGGGATGA TTTTTGGTCT GTTGCTGGCG GTACTTTTTA GCTATCGCAA ACCTCGTGAG
TATCAAGAAA CGGAATTGAC CGTAGTGCAA CAAGAAAGCT CGTCGATCAA TAAACAGCAT
ATCGCGATTG CGGGTGTCGG CATTGTGGCT GCATTAGCGG TGCAATTGTT GACGGGGTCT
ATGATCATTG GCGCACTAGC AGGCTTTATG GTATTCACTT TTGGGGGCGT GATTGCGTGG
AAAGAGACGC ATGATGTGTT CACAAGAGGC GTGCATATGA TGGCGATGAT TGGCTTTATC
ATGATTTCTG CGGCCGGTTT TGCCGCAGTG ATGAAAGCCA CTGGCGGCGT TGAAACACTG
GTCACTTCGC TTTCCACCAG CATTGGTGAC AATAAAGCTC TAGCAGCTCT GCTGATGTTA
GTCGTAGGCT TGTTGGTGAC TATGGGCATC GGCTCGTCAT TCTCGACCAT TCCGATCATC
GCAACCATCT ATGTGCCGCT GTGTCTTTCG TTTGGTTTTT CCCCAATGGC CACCGTTGCT
CTGGTCGGTA CCGCCGCTGC GTTAGGAGAT GCAGGATCTC CTGCGTCCGA TTCAACCTTA
GGCCCAACAT CCGGCCTCAA TGCGGATGGT CAGCACGAGC ATATTTGGGA AACCGTTGTG
CCAACCTTTA TTCACTACAA TCTGCCACTC ATCGTATTCG GTTGGATTGC CGCCATGGTG
CTGTAA
 
Protein sequence
MNPVVISVCV MLLLALMRVN VVVALTFSAV IGGLVAGMSL NETVAAFESG LGGGATIALS 
YAMLGTFAVA ISKSGITDLL AQSVIRRIHG QESHAASTGL KYLVLISLLL MAMASQNVIP
VHIAFIPILI PPLLSVFAKL KLDRRLVACV LTFGLITPYM VLPVGFGGIF LNNILLKNLH
ENGLESITAS QVPTAMILPA AGMIFGLLLA VLFSYRKPRE YQETELTVVQ QESSSINKQH
IAIAGVGIVA ALAVQLLTGS MIIGALAGFM VFTFGGVIAW KETHDVFTRG VHMMAMIGFI
MISAAGFAAV MKATGGVETL VTSLSTSIGD NKALAALLML VVGLLVTMGI GSSFSTIPII
ATIYVPLCLS FGFSPMATVA LVGTAAALGD AGSPASDSTL GPTSGLNADG QHEHIWETVV
PTFIHYNLPL IVFGWIAAMV L